Protein–RNA interactions for Protein: Q91UZ8

Pcdhb11, MCG141285, mousemouse

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb11Q91UZ8 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhb11Q91UZ8 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhb11Q91UZ8 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhb11Q91UZ8 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhb11Q91UZ8 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhb11Q91UZ8 AC135637.1-201ENSMUST00000227750 365 ntBASIC18.28■□□□□ 0.52
Pcdhb11Q91UZ8 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhb11Q91UZ8 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhb11Q91UZ8 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhb11Q91UZ8 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhb11Q91UZ8 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC18.28■□□□□ 0.52
Pcdhb11Q91UZ8 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhb11Q91UZ8 Alkbh1-212ENSMUST00000185301 408 ntBASIC18.27■□□□□ 0.52
Pcdhb11Q91UZ8 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhb11Q91UZ8 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhb11Q91UZ8 Gm37374-201ENSMUST00000194954 1829 ntBASIC18.27■□□□□ 0.52
Pcdhb11Q91UZ8 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Pcdhb11Q91UZ8 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Pcdhb11Q91UZ8 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Pcdhb11Q91UZ8 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
Pcdhb11Q91UZ8 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhb11Q91UZ8 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhb11Q91UZ8 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhb11Q91UZ8 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhb11Q91UZ8 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhb11Q91UZ8 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhb11Q91UZ8 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhb11Q91UZ8 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhb11Q91UZ8 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhb11Q91UZ8 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhb11Q91UZ8 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhb11Q91UZ8 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhb11Q91UZ8 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhb11Q91UZ8 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhb11Q91UZ8 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhb11Q91UZ8 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Pcdhb11Q91UZ8 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhb11Q91UZ8 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC18.25■□□□□ 0.51
Pcdhb11Q91UZ8 Gm44878-201ENSMUST00000205812 1295 ntBASIC18.25■□□□□ 0.51
Pcdhb11Q91UZ8 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhb11Q91UZ8 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhb11Q91UZ8 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhb11Q91UZ8 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhb11Q91UZ8 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC18.25■□□□□ 0.51
Pcdhb11Q91UZ8 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhb11Q91UZ8 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhb11Q91UZ8 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhb11Q91UZ8 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
Pcdhb11Q91UZ8 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhb11Q91UZ8 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Pcdhb11Q91UZ8 Gm13158-201ENSMUST00000122007 736 ntBASIC18.24■□□□□ 0.51
Pcdhb11Q91UZ8 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC18.24■□□□□ 0.51
Pcdhb11Q91UZ8 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC18.24■□□□□ 0.51
Pcdhb11Q91UZ8 Grk6-206ENSMUST00000224995 2971 ntBASIC18.24■□□□□ 0.51
Pcdhb11Q91UZ8 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhb11Q91UZ8 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhb11Q91UZ8 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhb11Q91UZ8 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
Pcdhb11Q91UZ8 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhb11Q91UZ8 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Pcdhb11Q91UZ8 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Pcdhb11Q91UZ8 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhb11Q91UZ8 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhb11Q91UZ8 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhb11Q91UZ8 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Pcdhb11Q91UZ8 Gm45141-201ENSMUST00000206502 1888 ntBASIC18.23■□□□□ 0.51
Pcdhb11Q91UZ8 Mir2861-201ENSMUST00000175539 82 ntBASIC18.23■□□□□ 0.51
Pcdhb11Q91UZ8 Gm10138-203ENSMUST00000206952 366 ntBASIC18.23■□□□□ 0.51
Pcdhb11Q91UZ8 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhb11Q91UZ8 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhb11Q91UZ8 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC18.23■□□□□ 0.51
Pcdhb11Q91UZ8 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Pcdhb11Q91UZ8 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhb11Q91UZ8 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhb11Q91UZ8 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhb11Q91UZ8 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhb11Q91UZ8 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhb11Q91UZ8 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhb11Q91UZ8 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
Pcdhb11Q91UZ8 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhb11Q91UZ8 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhb11Q91UZ8 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhb11Q91UZ8 Gm27011-201ENSMUST00000182352 972 ntBASIC18.22■□□□□ 0.51
Pcdhb11Q91UZ8 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhb11Q91UZ8 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhb11Q91UZ8 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhb11Q91UZ8 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhb11Q91UZ8 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhb11Q91UZ8 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhb11Q91UZ8 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhb11Q91UZ8 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhb11Q91UZ8 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhb11Q91UZ8 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhb11Q91UZ8 Gm5828-201ENSMUST00000071842 1860 ntBASIC18.21■□□□□ 0.51
Pcdhb11Q91UZ8 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhb11Q91UZ8 Gm20760-201ENSMUST00000179197 648 ntBASIC18.21■□□□□ 0.51
Pcdhb11Q91UZ8 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC18.21■□□□□ 0.51
Pcdhb11Q91UZ8 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC18.21■□□□□ 0.51
Pcdhb11Q91UZ8 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhb11Q91UZ8 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms