Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
Pcdh18Q8VHR0 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC17.18■□□□□ 0.34
Pcdh18Q8VHR0 Gm27032-201ENSMUST00000183124 1116 ntBASIC17.18■□□□□ 0.34
Pcdh18Q8VHR0 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdh18Q8VHR0 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdh18Q8VHR0 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdh18Q8VHR0 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC17.18■□□□□ 0.34
Pcdh18Q8VHR0 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdh18Q8VHR0 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdh18Q8VHR0 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdh18Q8VHR0 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC17.18■□□□□ 0.34
Pcdh18Q8VHR0 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdh18Q8VHR0 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdh18Q8VHR0 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
Pcdh18Q8VHR0 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdh18Q8VHR0 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdh18Q8VHR0 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdh18Q8VHR0 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC17.18■□□□□ 0.34
Pcdh18Q8VHR0 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdh18Q8VHR0 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdh18Q8VHR0 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Pcdh18Q8VHR0 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdh18Q8VHR0 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdh18Q8VHR0 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC17.17■□□□□ 0.34
Pcdh18Q8VHR0 Gm38205-201ENSMUST00000192243 258 ntBASIC17.17■□□□□ 0.34
Pcdh18Q8VHR0 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC17.17■□□□□ 0.34
Pcdh18Q8VHR0 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdh18Q8VHR0 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdh18Q8VHR0 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdh18Q8VHR0 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Pcdh18Q8VHR0 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Pcdh18Q8VHR0 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdh18Q8VHR0 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdh18Q8VHR0 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Pcdh18Q8VHR0 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdh18Q8VHR0 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdh18Q8VHR0 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdh18Q8VHR0 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdh18Q8VHR0 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdh18Q8VHR0 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdh18Q8VHR0 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdh18Q8VHR0 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdh18Q8VHR0 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdh18Q8VHR0 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdh18Q8VHR0 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdh18Q8VHR0 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdh18Q8VHR0 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
Pcdh18Q8VHR0 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdh18Q8VHR0 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
Pcdh18Q8VHR0 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdh18Q8VHR0 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdh18Q8VHR0 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdh18Q8VHR0 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdh18Q8VHR0 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdh18Q8VHR0 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdh18Q8VHR0 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdh18Q8VHR0 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdh18Q8VHR0 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdh18Q8VHR0 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Pcdh18Q8VHR0 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Pcdh18Q8VHR0 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdh18Q8VHR0 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC17.15■□□□□ 0.34
Pcdh18Q8VHR0 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdh18Q8VHR0 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdh18Q8VHR0 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdh18Q8VHR0 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdh18Q8VHR0 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdh18Q8VHR0 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdh18Q8VHR0 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdh18Q8VHR0 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdh18Q8VHR0 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdh18Q8VHR0 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdh18Q8VHR0 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdh18Q8VHR0 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Pcdh18Q8VHR0 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdh18Q8VHR0 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdh18Q8VHR0 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC17.14■□□□□ 0.33
Pcdh18Q8VHR0 Gm9988-201ENSMUST00000069786 435 ntBASIC17.14■□□□□ 0.33
Pcdh18Q8VHR0 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdh18Q8VHR0 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdh18Q8VHR0 Hivep3-201ENSMUST00000084306 2973 ntBASIC17.14■□□□□ 0.33
Pcdh18Q8VHR0 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdh18Q8VHR0 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdh18Q8VHR0 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC17.14■□□□□ 0.33
Pcdh18Q8VHR0 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdh18Q8VHR0 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Pcdh18Q8VHR0 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdh18Q8VHR0 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdh18Q8VHR0 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdh18Q8VHR0 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC17.13■□□□□ 0.33
Pcdh18Q8VHR0 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdh18Q8VHR0 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdh18Q8VHR0 Gm14026-201ENSMUST00000120625 1789 ntBASIC17.13■□□□□ 0.33
Pcdh18Q8VHR0 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC17.13■□□□□ 0.33
Pcdh18Q8VHR0 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdh18Q8VHR0 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdh18Q8VHR0 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Pcdh18Q8VHR0 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
Pcdh18Q8VHR0 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdh18Q8VHR0 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms