Protein–RNA interactions for Protein: Q8VDS4

Rprd1a, Regulation of nuclear pre-mRNA domain-containing protein 1A, mousemouse

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rprd1aQ8VDS4 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rprd1aQ8VDS4 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rprd1aQ8VDS4 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rprd1aQ8VDS4 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC18.3■□□□□ 0.52
Rprd1aQ8VDS4 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Rprd1aQ8VDS4 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC18.3■□□□□ 0.52
Rprd1aQ8VDS4 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC18.3■□□□□ 0.52
Rprd1aQ8VDS4 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rprd1aQ8VDS4 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rprd1aQ8VDS4 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Rprd1aQ8VDS4 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rprd1aQ8VDS4 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Rprd1aQ8VDS4 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rprd1aQ8VDS4 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rprd1aQ8VDS4 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Rprd1aQ8VDS4 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Rprd1aQ8VDS4 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rprd1aQ8VDS4 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC18.29■□□□□ 0.52
Rprd1aQ8VDS4 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Rprd1aQ8VDS4 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Rprd1aQ8VDS4 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC18.29■□□□□ 0.52
Rprd1aQ8VDS4 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rprd1aQ8VDS4 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rprd1aQ8VDS4 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rprd1aQ8VDS4 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rprd1aQ8VDS4 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Rprd1aQ8VDS4 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rprd1aQ8VDS4 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rprd1aQ8VDS4 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rprd1aQ8VDS4 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rprd1aQ8VDS4 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rprd1aQ8VDS4 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rprd1aQ8VDS4 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC18.28■□□□□ 0.52
Rprd1aQ8VDS4 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC18.28■□□□□ 0.52
Rprd1aQ8VDS4 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Rprd1aQ8VDS4 Mir6349-201ENSMUST00000184059 97 ntBASIC18.28■□□□□ 0.52
Rprd1aQ8VDS4 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rprd1aQ8VDS4 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC18.28■□□□□ 0.52
Rprd1aQ8VDS4 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Rprd1aQ8VDS4 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rprd1aQ8VDS4 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Rprd1aQ8VDS4 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rprd1aQ8VDS4 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Rprd1aQ8VDS4 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC18.27■□□□□ 0.52
Rprd1aQ8VDS4 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rprd1aQ8VDS4 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.52
Rprd1aQ8VDS4 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC18.27■□□□□ 0.52
Rprd1aQ8VDS4 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rprd1aQ8VDS4 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Rprd1aQ8VDS4 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC18.27■□□□□ 0.52
Rprd1aQ8VDS4 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rprd1aQ8VDS4 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rprd1aQ8VDS4 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC18.27■□□□□ 0.51
Rprd1aQ8VDS4 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Rprd1aQ8VDS4 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Rprd1aQ8VDS4 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rprd1aQ8VDS4 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rprd1aQ8VDS4 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC18.26■□□□□ 0.51
Rprd1aQ8VDS4 AC123834.2-201ENSMUST00000224038 2340 ntBASIC18.26■□□□□ 0.51
Rprd1aQ8VDS4 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
Rprd1aQ8VDS4 Gm18025-201ENSMUST00000221733 862 ntBASIC18.26■□□□□ 0.51
Rprd1aQ8VDS4 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rprd1aQ8VDS4 Gm19439-201ENSMUST00000198195 2273 ntBASIC18.26■□□□□ 0.51
Rprd1aQ8VDS4 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rprd1aQ8VDS4 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rprd1aQ8VDS4 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rprd1aQ8VDS4 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rprd1aQ8VDS4 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rprd1aQ8VDS4 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Rprd1aQ8VDS4 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rprd1aQ8VDS4 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rprd1aQ8VDS4 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rprd1aQ8VDS4 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rprd1aQ8VDS4 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rprd1aQ8VDS4 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rprd1aQ8VDS4 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rprd1aQ8VDS4 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC18.25■□□□□ 0.51
Rprd1aQ8VDS4 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC18.25■□□□□ 0.51
Rprd1aQ8VDS4 Mir2861-201ENSMUST00000175539 82 ntBASIC18.25■□□□□ 0.51
Rprd1aQ8VDS4 Gm42545-201ENSMUST00000202755 922 ntBASIC18.25■□□□□ 0.51
Rprd1aQ8VDS4 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rprd1aQ8VDS4 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rprd1aQ8VDS4 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rprd1aQ8VDS4 AC108858.1-201ENSMUST00000228461 1498 ntBASIC18.25■□□□□ 0.51
Rprd1aQ8VDS4 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rprd1aQ8VDS4 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rprd1aQ8VDS4 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Rprd1aQ8VDS4 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rprd1aQ8VDS4 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rprd1aQ8VDS4 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rprd1aQ8VDS4 Gm29241-201ENSMUST00000189260 1096 ntBASIC18.24■□□□□ 0.51
Rprd1aQ8VDS4 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC18.24■□□□□ 0.51
Rprd1aQ8VDS4 AC154649.1-201ENSMUST00000227392 384 ntBASIC18.24■□□□□ 0.51
Rprd1aQ8VDS4 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rprd1aQ8VDS4 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Rprd1aQ8VDS4 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Rprd1aQ8VDS4 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rprd1aQ8VDS4 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Rprd1aQ8VDS4 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Rprd1aQ8VDS4 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms