Protein–RNA interactions for Protein: Q8VDP2

UPF0428 protein CXorf56 homolog, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q8VDP2 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
Q8VDP2 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Q8VDP2 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Q8VDP2 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Q8VDP2 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC17.39■□□□□ 0.37
Q8VDP2 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Q8VDP2 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Q8VDP2 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Q8VDP2 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Q8VDP2 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Q8VDP2 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Q8VDP2 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Q8VDP2 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Q8VDP2 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Q8VDP2 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Q8VDP2 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Q8VDP2 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC17.38■□□□□ 0.37
Q8VDP2 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Q8VDP2 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Q8VDP2 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Q8VDP2 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Q8VDP2 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Q8VDP2 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Q8VDP2 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Q8VDP2 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Q8VDP2 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Q8VDP2 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Q8VDP2 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Q8VDP2 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Q8VDP2 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Q8VDP2 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Q8VDP2 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Q8VDP2 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Q8VDP2 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Q8VDP2 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC17.37■□□□□ 0.37
Q8VDP2 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Q8VDP2 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Q8VDP2 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Q8VDP2 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC17.37■□□□□ 0.37
Q8VDP2 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Q8VDP2 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Q8VDP2 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Q8VDP2 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Q8VDP2 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Q8VDP2 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Q8VDP2 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Q8VDP2 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Q8VDP2 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Q8VDP2 Gm11847-201ENSMUST00000125165 1119 ntBASIC17.36■□□□□ 0.37
Q8VDP2 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Q8VDP2 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC17.36■□□□□ 0.37
Q8VDP2 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Q8VDP2 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
Q8VDP2 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Q8VDP2 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Q8VDP2 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Q8VDP2 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Q8VDP2 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Q8VDP2 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC17.35■□□□□ 0.37
Q8VDP2 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Q8VDP2 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Q8VDP2 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Q8VDP2 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Q8VDP2 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Q8VDP2 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Q8VDP2 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Q8VDP2 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Q8VDP2 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Q8VDP2 Gm45212-201ENSMUST00000205831 3403 ntBASIC17.35■□□□□ 0.37
Q8VDP2 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Q8VDP2 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC17.35■□□□□ 0.37
Q8VDP2 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Q8VDP2 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Q8VDP2 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Q8VDP2 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Q8VDP2 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Q8VDP2 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Q8VDP2 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Q8VDP2 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC17.34■□□□□ 0.37
Q8VDP2 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC17.34■□□□□ 0.37
Q8VDP2 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Q8VDP2 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Q8VDP2 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC17.34■□□□□ 0.37
Q8VDP2 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Q8VDP2 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Q8VDP2 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Q8VDP2 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
Q8VDP2 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Q8VDP2 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC17.34■□□□□ 0.37
Q8VDP2 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Q8VDP2 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Q8VDP2 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Q8VDP2 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Q8VDP2 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Q8VDP2 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Q8VDP2 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Q8VDP2 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Q8VDP2 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Q8VDP2 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Q8VDP2 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms