Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
Vps39Q8R5L3 Gm8969-201ENSMUST00000199694 526 ntBASIC17.86■□□□□ 0.45
Vps39Q8R5L3 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC17.86■□□□□ 0.45
Vps39Q8R5L3 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Vps39Q8R5L3 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Vps39Q8R5L3 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Vps39Q8R5L3 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Vps39Q8R5L3 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Vps39Q8R5L3 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Vps39Q8R5L3 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Vps39Q8R5L3 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Vps39Q8R5L3 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Vps39Q8R5L3 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Vps39Q8R5L3 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Vps39Q8R5L3 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
Vps39Q8R5L3 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Vps39Q8R5L3 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC17.85■□□□□ 0.45
Vps39Q8R5L3 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Vps39Q8R5L3 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Vps39Q8R5L3 Gm8495-201ENSMUST00000188740 694 ntBASIC17.85■□□□□ 0.45
Vps39Q8R5L3 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Vps39Q8R5L3 Gm42555-201ENSMUST00000199304 1039 ntBASIC17.85■□□□□ 0.45
Vps39Q8R5L3 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC17.85■□□□□ 0.45
Vps39Q8R5L3 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Vps39Q8R5L3 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Vps39Q8R5L3 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Vps39Q8R5L3 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Vps39Q8R5L3 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Vps39Q8R5L3 Gm26571-201ENSMUST00000181399 666 ntBASIC17.84■□□□□ 0.45
Vps39Q8R5L3 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Vps39Q8R5L3 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Vps39Q8R5L3 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Vps39Q8R5L3 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC17.84■□□□□ 0.45
Vps39Q8R5L3 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Vps39Q8R5L3 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Vps39Q8R5L3 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Vps39Q8R5L3 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Vps39Q8R5L3 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Vps39Q8R5L3 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Vps39Q8R5L3 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Vps39Q8R5L3 Gm37563-201ENSMUST00000192580 1513 ntBASIC17.83■□□□□ 0.45
Vps39Q8R5L3 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Vps39Q8R5L3 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Vps39Q8R5L3 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Vps39Q8R5L3 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Vps39Q8R5L3 Gm6211-202ENSMUST00000167849 925 ntBASIC17.83■□□□□ 0.44
Vps39Q8R5L3 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Vps39Q8R5L3 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Vps39Q8R5L3 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Vps39Q8R5L3 Gm44544-201ENSMUST00000207052 1844 ntBASIC17.82■□□□□ 0.44
Vps39Q8R5L3 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Vps39Q8R5L3 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC17.82■□□□□ 0.44
Vps39Q8R5L3 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Vps39Q8R5L3 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Vps39Q8R5L3 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC17.82■□□□□ 0.44
Vps39Q8R5L3 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Vps39Q8R5L3 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Vps39Q8R5L3 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC17.82■□□□□ 0.44
Vps39Q8R5L3 Gm7291-201ENSMUST00000199147 382 ntBASIC17.82■□□□□ 0.44
Vps39Q8R5L3 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC17.82■□□□□ 0.44
Vps39Q8R5L3 AC140264.2-202ENSMUST00000218746 817 ntBASIC17.82■□□□□ 0.44
Vps39Q8R5L3 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Vps39Q8R5L3 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Vps39Q8R5L3 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Vps39Q8R5L3 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC17.82■□□□□ 0.44
Vps39Q8R5L3 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Vps39Q8R5L3 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC17.82■□□□□ 0.44
Vps39Q8R5L3 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Vps39Q8R5L3 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC17.81■□□□□ 0.44
Vps39Q8R5L3 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Vps39Q8R5L3 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Vps39Q8R5L3 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Vps39Q8R5L3 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Vps39Q8R5L3 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Vps39Q8R5L3 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Vps39Q8R5L3 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Vps39Q8R5L3 Fcho2-208ENSMUST00000224992 2964 ntBASIC17.81■□□□□ 0.44
Vps39Q8R5L3 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Vps39Q8R5L3 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Vps39Q8R5L3 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Vps39Q8R5L3 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Vps39Q8R5L3 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Vps39Q8R5L3 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Vps39Q8R5L3 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Vps39Q8R5L3 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC17.8■□□□□ 0.44
Vps39Q8R5L3 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Vps39Q8R5L3 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC17.8■□□□□ 0.44
Vps39Q8R5L3 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Vps39Q8R5L3 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Vps39Q8R5L3 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC17.8■□□□□ 0.44
Vps39Q8R5L3 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Vps39Q8R5L3 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Vps39Q8R5L3 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Vps39Q8R5L3 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Vps39Q8R5L3 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Vps39Q8R5L3 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Vps39Q8R5L3 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Vps39Q8R5L3 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Vps39Q8R5L3 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Vps39Q8R5L3 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC17.79■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms