Protein–RNA interactions for Protein: Q8R550

Sh3kbp1, SH3 domain-containing kinase-binding protein 1, mousemouse

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3kbp1Q8R550 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sh3kbp1Q8R550 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sh3kbp1Q8R550 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sh3kbp1Q8R550 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Sh3kbp1Q8R550 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sh3kbp1Q8R550 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sh3kbp1Q8R550 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Sh3kbp1Q8R550 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sh3kbp1Q8R550 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sh3kbp1Q8R550 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sh3kbp1Q8R550 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Sh3kbp1Q8R550 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sh3kbp1Q8R550 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC18.35■□□□□ 0.53
Sh3kbp1Q8R550 Wnt10b-205ENSMUST00000226846 1204 ntBASIC18.35■□□□□ 0.53
Sh3kbp1Q8R550 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sh3kbp1Q8R550 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sh3kbp1Q8R550 Gm45141-201ENSMUST00000206502 1888 ntBASIC18.35■□□□□ 0.53
Sh3kbp1Q8R550 Gm38308-201ENSMUST00000194934 1809 ntBASIC18.35■□□□□ 0.53
Sh3kbp1Q8R550 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Sh3kbp1Q8R550 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sh3kbp1Q8R550 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sh3kbp1Q8R550 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sh3kbp1Q8R550 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sh3kbp1Q8R550 Gm11927-201ENSMUST00000118472 759 ntBASIC18.34■□□□□ 0.53
Sh3kbp1Q8R550 AC135963.1-201ENSMUST00000211640 717 ntBASIC18.34■□□□□ 0.53
Sh3kbp1Q8R550 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sh3kbp1Q8R550 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Sh3kbp1Q8R550 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Sh3kbp1Q8R550 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Sh3kbp1Q8R550 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC18.34■□□□□ 0.53
Sh3kbp1Q8R550 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sh3kbp1Q8R550 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Sh3kbp1Q8R550 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Sh3kbp1Q8R550 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
Sh3kbp1Q8R550 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Sh3kbp1Q8R550 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
Sh3kbp1Q8R550 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Sh3kbp1Q8R550 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Sh3kbp1Q8R550 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC18.33■□□□□ 0.52
Sh3kbp1Q8R550 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC18.33■□□□□ 0.52
Sh3kbp1Q8R550 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Sh3kbp1Q8R550 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Sh3kbp1Q8R550 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Sh3kbp1Q8R550 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Sh3kbp1Q8R550 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC18.33■□□□□ 0.52
Sh3kbp1Q8R550 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Sh3kbp1Q8R550 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Sh3kbp1Q8R550 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Sh3kbp1Q8R550 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC18.33■□□□□ 0.52
Sh3kbp1Q8R550 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Sh3kbp1Q8R550 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC18.33■□□□□ 0.52
Sh3kbp1Q8R550 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Sh3kbp1Q8R550 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Sh3kbp1Q8R550 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Sh3kbp1Q8R550 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Sh3kbp1Q8R550 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Sh3kbp1Q8R550 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sh3kbp1Q8R550 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sh3kbp1Q8R550 AC121961.1-201ENSMUST00000218594 1779 ntBASIC18.32■□□□□ 0.52
Sh3kbp1Q8R550 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Sh3kbp1Q8R550 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC18.32■□□□□ 0.52
Sh3kbp1Q8R550 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sh3kbp1Q8R550 CT010444.2-201ENSMUST00000217877 1629 ntBASIC18.32■□□□□ 0.52
Sh3kbp1Q8R550 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sh3kbp1Q8R550 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC18.32■□□□□ 0.52
Sh3kbp1Q8R550 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Sh3kbp1Q8R550 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sh3kbp1Q8R550 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC18.32■□□□□ 0.52
Sh3kbp1Q8R550 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sh3kbp1Q8R550 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sh3kbp1Q8R550 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sh3kbp1Q8R550 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Sh3kbp1Q8R550 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sh3kbp1Q8R550 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sh3kbp1Q8R550 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sh3kbp1Q8R550 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
Sh3kbp1Q8R550 Dmtn-207ENSMUST00000228001 2437 ntBASIC18.31■□□□□ 0.52
Sh3kbp1Q8R550 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sh3kbp1Q8R550 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sh3kbp1Q8R550 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sh3kbp1Q8R550 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
Sh3kbp1Q8R550 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Sh3kbp1Q8R550 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sh3kbp1Q8R550 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Sh3kbp1Q8R550 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Sh3kbp1Q8R550 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC18.31■□□□□ 0.52
Sh3kbp1Q8R550 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Sh3kbp1Q8R550 Krtap5-1-202ENSMUST00000188274 742 ntBASIC18.31■□□□□ 0.52
Sh3kbp1Q8R550 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC18.31■□□□□ 0.52
Sh3kbp1Q8R550 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC18.31■□□□□ 0.52
Sh3kbp1Q8R550 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Sh3kbp1Q8R550 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sh3kbp1Q8R550 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC18.31■□□□□ 0.52
Sh3kbp1Q8R550 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Sh3kbp1Q8R550 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
Sh3kbp1Q8R550 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Sh3kbp1Q8R550 Flg-201ENSMUST00000050758 1488 ntBASIC18.31■□□□□ 0.52
Sh3kbp1Q8R550 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sh3kbp1Q8R550 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC18.31■□□□□ 0.52
Sh3kbp1Q8R550 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms