Protein–RNA interactions for Protein: Q8R4G9

Chrna3, Neuronal acetylcholine receptor subunit alpha-3, mousemouse

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna3Q8R4G9 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Chrna3Q8R4G9 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Chrna3Q8R4G9 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Chrna3Q8R4G9 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Chrna3Q8R4G9 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Chrna3Q8R4G9 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Chrna3Q8R4G9 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Chrna3Q8R4G9 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Chrna3Q8R4G9 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC17.49■□□□□ 0.39
Chrna3Q8R4G9 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Chrna3Q8R4G9 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Chrna3Q8R4G9 Tgds-204ENSMUST00000228543 1594 ntBASIC17.49■□□□□ 0.39
Chrna3Q8R4G9 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Chrna3Q8R4G9 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Chrna3Q8R4G9 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Chrna3Q8R4G9 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC17.48■□□□□ 0.39
Chrna3Q8R4G9 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Chrna3Q8R4G9 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Chrna3Q8R4G9 Gm6576-201ENSMUST00000169678 883 ntBASIC17.48■□□□□ 0.39
Chrna3Q8R4G9 Gm10252-201ENSMUST00000209541 832 ntBASIC17.48■□□□□ 0.39
Chrna3Q8R4G9 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Chrna3Q8R4G9 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Chrna3Q8R4G9 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Chrna3Q8R4G9 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Chrna3Q8R4G9 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Chrna3Q8R4G9 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Chrna3Q8R4G9 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
Chrna3Q8R4G9 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Chrna3Q8R4G9 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Chrna3Q8R4G9 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
Chrna3Q8R4G9 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
Chrna3Q8R4G9 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Chrna3Q8R4G9 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Chrna3Q8R4G9 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC17.47■□□□□ 0.39
Chrna3Q8R4G9 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Chrna3Q8R4G9 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Chrna3Q8R4G9 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Chrna3Q8R4G9 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Chrna3Q8R4G9 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Chrna3Q8R4G9 CT010444.2-201ENSMUST00000217877 1629 ntBASIC17.47■□□□□ 0.39
Chrna3Q8R4G9 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Chrna3Q8R4G9 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC17.46■□□□□ 0.39
Chrna3Q8R4G9 Gm42545-201ENSMUST00000202755 922 ntBASIC17.46■□□□□ 0.39
Chrna3Q8R4G9 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Chrna3Q8R4G9 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Chrna3Q8R4G9 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Chrna3Q8R4G9 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC17.46■□□□□ 0.38
Chrna3Q8R4G9 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Chrna3Q8R4G9 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Chrna3Q8R4G9 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Chrna3Q8R4G9 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Chrna3Q8R4G9 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Chrna3Q8R4G9 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC17.45■□□□□ 0.38
Chrna3Q8R4G9 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC17.45■□□□□ 0.38
Chrna3Q8R4G9 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC17.45■□□□□ 0.38
Chrna3Q8R4G9 Gm43183-201ENSMUST00000200632 547 ntBASIC17.45■□□□□ 0.38
Chrna3Q8R4G9 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC17.45■□□□□ 0.38
Chrna3Q8R4G9 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Chrna3Q8R4G9 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Chrna3Q8R4G9 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Chrna3Q8R4G9 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Chrna3Q8R4G9 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Chrna3Q8R4G9 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Chrna3Q8R4G9 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Chrna3Q8R4G9 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Chrna3Q8R4G9 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Chrna3Q8R4G9 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Chrna3Q8R4G9 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Chrna3Q8R4G9 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Chrna3Q8R4G9 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Chrna3Q8R4G9 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC17.44■□□□□ 0.38
Chrna3Q8R4G9 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC17.44■□□□□ 0.38
Chrna3Q8R4G9 Mir2861-201ENSMUST00000175539 82 ntBASIC17.44■□□□□ 0.38
Chrna3Q8R4G9 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Chrna3Q8R4G9 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Chrna3Q8R4G9 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Chrna3Q8R4G9 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Chrna3Q8R4G9 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Chrna3Q8R4G9 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Chrna3Q8R4G9 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Chrna3Q8R4G9 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC17.43■□□□□ 0.38
Chrna3Q8R4G9 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Chrna3Q8R4G9 Mir1199-201ENSMUST00000117015 119 ntBASIC17.43■□□□□ 0.38
Chrna3Q8R4G9 Gm29241-201ENSMUST00000189260 1096 ntBASIC17.43■□□□□ 0.38
Chrna3Q8R4G9 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC17.43■□□□□ 0.38
Chrna3Q8R4G9 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Chrna3Q8R4G9 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
Chrna3Q8R4G9 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Chrna3Q8R4G9 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC17.43■□□□□ 0.38
Chrna3Q8R4G9 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC17.43■□□□□ 0.38
Chrna3Q8R4G9 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Chrna3Q8R4G9 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Chrna3Q8R4G9 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Chrna3Q8R4G9 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Chrna3Q8R4G9 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Chrna3Q8R4G9 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Chrna3Q8R4G9 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Chrna3Q8R4G9 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Chrna3Q8R4G9 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Chrna3Q8R4G9 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 13.1 ms