Protein–RNA interactions for Protein: Q8R4E9

Cdt1, DNA replication factor Cdt1, mousemouse

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdt1Q8R4E9 Gm9987-201ENSMUST00000069768 567 ntBASIC17.23■□□□□ 0.35
Cdt1Q8R4E9 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Cdt1Q8R4E9 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cdt1Q8R4E9 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cdt1Q8R4E9 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cdt1Q8R4E9 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cdt1Q8R4E9 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cdt1Q8R4E9 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
Cdt1Q8R4E9 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Cdt1Q8R4E9 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
Cdt1Q8R4E9 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cdt1Q8R4E9 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cdt1Q8R4E9 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Cdt1Q8R4E9 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC17.22■□□□□ 0.35
Cdt1Q8R4E9 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC17.22■□□□□ 0.35
Cdt1Q8R4E9 Gm15378-201ENSMUST00000121894 207 ntBASIC17.22■□□□□ 0.35
Cdt1Q8R4E9 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cdt1Q8R4E9 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC17.22■□□□□ 0.35
Cdt1Q8R4E9 Gm9484-201ENSMUST00000195892 1159 ntBASIC17.22■□□□□ 0.35
Cdt1Q8R4E9 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Cdt1Q8R4E9 AC121577.1-201ENSMUST00000227302 707 ntBASIC17.22■□□□□ 0.35
Cdt1Q8R4E9 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
Cdt1Q8R4E9 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cdt1Q8R4E9 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cdt1Q8R4E9 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Cdt1Q8R4E9 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cdt1Q8R4E9 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Cdt1Q8R4E9 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cdt1Q8R4E9 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Cdt1Q8R4E9 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC17.21■□□□□ 0.35
Cdt1Q8R4E9 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cdt1Q8R4E9 Gm38308-201ENSMUST00000194934 1809 ntBASIC17.21■□□□□ 0.35
Cdt1Q8R4E9 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC17.21■□□□□ 0.35
Cdt1Q8R4E9 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cdt1Q8R4E9 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Cdt1Q8R4E9 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cdt1Q8R4E9 Gm19439-201ENSMUST00000198195 2273 ntBASIC17.21■□□□□ 0.35
Cdt1Q8R4E9 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cdt1Q8R4E9 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Cdt1Q8R4E9 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cdt1Q8R4E9 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Cdt1Q8R4E9 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cdt1Q8R4E9 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cdt1Q8R4E9 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Cdt1Q8R4E9 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC17.21■□□□□ 0.35
Cdt1Q8R4E9 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
Cdt1Q8R4E9 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
Cdt1Q8R4E9 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cdt1Q8R4E9 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cdt1Q8R4E9 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Cdt1Q8R4E9 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Cdt1Q8R4E9 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cdt1Q8R4E9 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cdt1Q8R4E9 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.34
Cdt1Q8R4E9 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.34
Cdt1Q8R4E9 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cdt1Q8R4E9 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cdt1Q8R4E9 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cdt1Q8R4E9 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cdt1Q8R4E9 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cdt1Q8R4E9 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
Cdt1Q8R4E9 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC17.2■□□□□ 0.34
Cdt1Q8R4E9 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cdt1Q8R4E9 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Cdt1Q8R4E9 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC17.2■□□□□ 0.34
Cdt1Q8R4E9 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cdt1Q8R4E9 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Cdt1Q8R4E9 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
Cdt1Q8R4E9 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cdt1Q8R4E9 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC17.2■□□□□ 0.34
Cdt1Q8R4E9 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC17.2■□□□□ 0.34
Cdt1Q8R4E9 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
Cdt1Q8R4E9 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Cdt1Q8R4E9 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC17.2■□□□□ 0.34
Cdt1Q8R4E9 AC140264.2-202ENSMUST00000218746 817 ntBASIC17.2■□□□□ 0.34
Cdt1Q8R4E9 AC107452.1-201ENSMUST00000227963 481 ntBASIC17.2■□□□□ 0.34
Cdt1Q8R4E9 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Cdt1Q8R4E9 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cdt1Q8R4E9 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
Cdt1Q8R4E9 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cdt1Q8R4E9 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cdt1Q8R4E9 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Cdt1Q8R4E9 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cdt1Q8R4E9 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cdt1Q8R4E9 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cdt1Q8R4E9 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC17.19■□□□□ 0.34
Cdt1Q8R4E9 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cdt1Q8R4E9 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cdt1Q8R4E9 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Cdt1Q8R4E9 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Cdt1Q8R4E9 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cdt1Q8R4E9 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Cdt1Q8R4E9 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Cdt1Q8R4E9 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cdt1Q8R4E9 Mir1199-201ENSMUST00000117015 119 ntBASIC17.19■□□□□ 0.34
Cdt1Q8R4E9 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC17.19■□□□□ 0.34
Cdt1Q8R4E9 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC17.19■□□□□ 0.34
Cdt1Q8R4E9 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Cdt1Q8R4E9 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Cdt1Q8R4E9 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC17.19■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms