Protein–RNA interactions for Protein: Q8R422

Cd109, CD109 antigen, mousemouse

Predictions only

Length 1,442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd109Q8R422 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC25.37■■□□□ 1.65
Cd109Q8R422 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
Cd109Q8R422 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
Cd109Q8R422 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC25.37■■□□□ 1.65
Cd109Q8R422 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC25.36■■□□□ 1.65
Cd109Q8R422 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC25.36■■□□□ 1.65
Cd109Q8R422 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC25.36■■□□□ 1.65
Cd109Q8R422 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC25.36■■□□□ 1.65
Cd109Q8R422 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
Cd109Q8R422 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC25.36■■□□□ 1.65
Cd109Q8R422 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC25.36■■□□□ 1.65
Cd109Q8R422 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
Cd109Q8R422 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC25.36■■□□□ 1.65
Cd109Q8R422 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Cd109Q8R422 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC25.36■■□□□ 1.65
Cd109Q8R422 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Cd109Q8R422 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC25.35■■□□□ 1.65
Cd109Q8R422 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Cd109Q8R422 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Cd109Q8R422 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
Cd109Q8R422 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Cd109Q8R422 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC25.35■■□□□ 1.65
Cd109Q8R422 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Cd109Q8R422 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Cd109Q8R422 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
Cd109Q8R422 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC25.35■■□□□ 1.65
Cd109Q8R422 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
Cd109Q8R422 Gm22697-201ENSMUST00000175194 63 ntBASIC25.35■■□□□ 1.65
Cd109Q8R422 Gm33142-201ENSMUST00000193913 867 ntBASIC25.35■■□□□ 1.65
Cd109Q8R422 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Cd109Q8R422 Gm37374-201ENSMUST00000194954 1829 ntBASIC25.35■■□□□ 1.65
Cd109Q8R422 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC25.35■■□□□ 1.65
Cd109Q8R422 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Cd109Q8R422 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
Cd109Q8R422 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Cd109Q8R422 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC25.34■■□□□ 1.65
Cd109Q8R422 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC25.34■■□□□ 1.65
Cd109Q8R422 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Cd109Q8R422 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Cd109Q8R422 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
Cd109Q8R422 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Cd109Q8R422 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC25.34■■□□□ 1.65
Cd109Q8R422 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC25.34■■□□□ 1.65
Cd109Q8R422 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
Cd109Q8R422 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
Cd109Q8R422 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC25.34■■□□□ 1.65
Cd109Q8R422 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Cd109Q8R422 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Cd109Q8R422 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC25.34■■□□□ 1.65
Cd109Q8R422 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Cd109Q8R422 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC25.33■■□□□ 1.65
Cd109Q8R422 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC25.33■■□□□ 1.65
Cd109Q8R422 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
Cd109Q8R422 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC25.33■■□□□ 1.65
Cd109Q8R422 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC25.33■■□□□ 1.65
Cd109Q8R422 Gm9731-201ENSMUST00000209480 747 ntBASIC25.33■■□□□ 1.65
Cd109Q8R422 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Cd109Q8R422 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
Cd109Q8R422 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC25.33■■□□□ 1.65
Cd109Q8R422 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Cd109Q8R422 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Cd109Q8R422 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Cd109Q8R422 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Cd109Q8R422 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC25.32■■□□□ 1.64
Cd109Q8R422 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC25.32■■□□□ 1.64
Cd109Q8R422 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC25.32■■□□□ 1.64
Cd109Q8R422 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC25.32■■□□□ 1.64
Cd109Q8R422 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Cd109Q8R422 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Cd109Q8R422 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC25.32■■□□□ 1.64
Cd109Q8R422 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC25.32■■□□□ 1.64
Cd109Q8R422 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
Cd109Q8R422 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Cd109Q8R422 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC25.32■■□□□ 1.64
Cd109Q8R422 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC25.32■■□□□ 1.64
Cd109Q8R422 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Cd109Q8R422 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Cd109Q8R422 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC25.32■■□□□ 1.64
Cd109Q8R422 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Cd109Q8R422 Gm38342-201ENSMUST00000195710 2980 ntBASIC25.32■■□□□ 1.64
Cd109Q8R422 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Cd109Q8R422 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Cd109Q8R422 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
Cd109Q8R422 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC25.31■■□□□ 1.64
Cd109Q8R422 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Cd109Q8R422 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
Cd109Q8R422 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC25.31■■□□□ 1.64
Cd109Q8R422 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC25.31■■□□□ 1.64
Cd109Q8R422 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Cd109Q8R422 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Cd109Q8R422 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC25.31■■□□□ 1.64
Cd109Q8R422 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC25.3■■□□□ 1.64
Cd109Q8R422 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Cd109Q8R422 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
Cd109Q8R422 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Cd109Q8R422 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC25.3■■□□□ 1.64
Cd109Q8R422 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
Cd109Q8R422 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Cd109Q8R422 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC25.3■■□□□ 1.64
Cd109Q8R422 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC25.3■■□□□ 1.64
Retrieved 100 of 76,532 protein–RNA pairs in 11.5 ms