Protein–RNA interactions for Protein: Q8R3B7

Brd8, Bromodomain-containing protein 8, mousemouse

Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brd8Q8R3B7 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Brd8Q8R3B7 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Brd8Q8R3B7 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Brd8Q8R3B7 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Brd8Q8R3B7 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Brd8Q8R3B7 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Brd8Q8R3B7 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Brd8Q8R3B7 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Brd8Q8R3B7 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Brd8Q8R3B7 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Brd8Q8R3B7 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC18.17■□□□□ 0.5
Brd8Q8R3B7 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Brd8Q8R3B7 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC18.17■□□□□ 0.5
Brd8Q8R3B7 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Brd8Q8R3B7 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Brd8Q8R3B7 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Brd8Q8R3B7 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Brd8Q8R3B7 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Brd8Q8R3B7 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Brd8Q8R3B7 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Brd8Q8R3B7 Gm10654-201ENSMUST00000098653 1633 ntBASIC18.16■□□□□ 0.5
Brd8Q8R3B7 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Brd8Q8R3B7 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Brd8Q8R3B7 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Brd8Q8R3B7 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Brd8Q8R3B7 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Brd8Q8R3B7 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Brd8Q8R3B7 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Brd8Q8R3B7 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Brd8Q8R3B7 AC166341.7-201ENSMUST00000221698 126 ntBASIC18.16■□□□□ 0.5
Brd8Q8R3B7 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC18.16■□□□□ 0.5
Brd8Q8R3B7 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Brd8Q8R3B7 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Brd8Q8R3B7 AC124581.1-201ENSMUST00000225416 1399 ntBASIC18.16■□□□□ 0.5
Brd8Q8R3B7 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Brd8Q8R3B7 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Brd8Q8R3B7 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Brd8Q8R3B7 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Brd8Q8R3B7 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
Brd8Q8R3B7 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Brd8Q8R3B7 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Brd8Q8R3B7 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Brd8Q8R3B7 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Brd8Q8R3B7 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC18.15■□□□□ 0.5
Brd8Q8R3B7 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC18.15■□□□□ 0.5
Brd8Q8R3B7 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC18.15■□□□□ 0.5
Brd8Q8R3B7 Gm42545-201ENSMUST00000202755 922 ntBASIC18.15■□□□□ 0.5
Brd8Q8R3B7 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Brd8Q8R3B7 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Brd8Q8R3B7 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Brd8Q8R3B7 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Brd8Q8R3B7 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Brd8Q8R3B7 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Brd8Q8R3B7 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.5
Brd8Q8R3B7 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Brd8Q8R3B7 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Brd8Q8R3B7 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Brd8Q8R3B7 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC18.14■□□□□ 0.49
Brd8Q8R3B7 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC18.14■□□□□ 0.49
Brd8Q8R3B7 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Brd8Q8R3B7 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC18.14■□□□□ 0.49
Brd8Q8R3B7 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC18.14■□□□□ 0.49
Brd8Q8R3B7 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Brd8Q8R3B7 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Brd8Q8R3B7 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Brd8Q8R3B7 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Brd8Q8R3B7 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Brd8Q8R3B7 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Brd8Q8R3B7 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Brd8Q8R3B7 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Brd8Q8R3B7 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Brd8Q8R3B7 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Brd8Q8R3B7 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Brd8Q8R3B7 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Brd8Q8R3B7 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Brd8Q8R3B7 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Brd8Q8R3B7 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Brd8Q8R3B7 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC18.13■□□□□ 0.49
Brd8Q8R3B7 Gm43183-201ENSMUST00000200632 547 ntBASIC18.13■□□□□ 0.49
Brd8Q8R3B7 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Brd8Q8R3B7 Gm37374-201ENSMUST00000194954 1829 ntBASIC18.13■□□□□ 0.49
Brd8Q8R3B7 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Brd8Q8R3B7 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Brd8Q8R3B7 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Brd8Q8R3B7 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Brd8Q8R3B7 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Brd8Q8R3B7 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Brd8Q8R3B7 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Brd8Q8R3B7 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Brd8Q8R3B7 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Brd8Q8R3B7 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Brd8Q8R3B7 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Brd8Q8R3B7 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Brd8Q8R3B7 Gm37292-201ENSMUST00000192062 758 ntBASIC18.12■□□□□ 0.49
Brd8Q8R3B7 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Brd8Q8R3B7 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC18.12■□□□□ 0.49
Brd8Q8R3B7 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Brd8Q8R3B7 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC18.12■□□□□ 0.49
Brd8Q8R3B7 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Brd8Q8R3B7 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC18.12■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms