Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Chmp7Q8R1T1 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Chmp7Q8R1T1 Gm5784-201ENSMUST00000179344 2478 ntBASIC22.82■■□□□ 1.24
Chmp7Q8R1T1 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC22.82■■□□□ 1.24
Chmp7Q8R1T1 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC22.82■■□□□ 1.24
Chmp7Q8R1T1 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC22.82■■□□□ 1.24
Chmp7Q8R1T1 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
Chmp7Q8R1T1 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
Chmp7Q8R1T1 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC22.82■■□□□ 1.24
Chmp7Q8R1T1 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Chmp7Q8R1T1 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Chmp7Q8R1T1 Tgds-204ENSMUST00000228543 1594 ntBASIC22.81■■□□□ 1.24
Chmp7Q8R1T1 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Chmp7Q8R1T1 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Chmp7Q8R1T1 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC22.81■■□□□ 1.24
Chmp7Q8R1T1 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
Chmp7Q8R1T1 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC22.81■■□□□ 1.24
Chmp7Q8R1T1 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Chmp7Q8R1T1 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC22.81■■□□□ 1.24
Chmp7Q8R1T1 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Chmp7Q8R1T1 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC22.8■■□□□ 1.24
Chmp7Q8R1T1 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC22.8■■□□□ 1.24
Chmp7Q8R1T1 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC22.8■■□□□ 1.24
Chmp7Q8R1T1 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Chmp7Q8R1T1 Gm10819-201ENSMUST00000099988 561 ntBASIC22.8■■□□□ 1.24
Chmp7Q8R1T1 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Chmp7Q8R1T1 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC22.8■■□□□ 1.24
Chmp7Q8R1T1 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
Chmp7Q8R1T1 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC22.79■■□□□ 1.24
Chmp7Q8R1T1 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC22.79■■□□□ 1.24
Chmp7Q8R1T1 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Chmp7Q8R1T1 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC22.79■■□□□ 1.24
Chmp7Q8R1T1 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC22.79■■□□□ 1.24
Chmp7Q8R1T1 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC22.79■■□□□ 1.24
Chmp7Q8R1T1 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Chmp7Q8R1T1 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC22.79■■□□□ 1.24
Chmp7Q8R1T1 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Chmp7Q8R1T1 Dapk1-207ENSMUST00000226059 5009 ntBASIC22.79■■□□□ 1.24
Chmp7Q8R1T1 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC22.79■■□□□ 1.24
Chmp7Q8R1T1 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC22.79■■□□□ 1.24
Chmp7Q8R1T1 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Chmp7Q8R1T1 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC22.79■■□□□ 1.24
Chmp7Q8R1T1 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC22.78■■□□□ 1.24
Chmp7Q8R1T1 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC22.78■■□□□ 1.24
Chmp7Q8R1T1 Gm13401-201ENSMUST00000117074 291 ntBASIC22.78■■□□□ 1.24
Chmp7Q8R1T1 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Chmp7Q8R1T1 Gm6728-201ENSMUST00000178117 1065 ntBASIC22.78■■□□□ 1.24
Chmp7Q8R1T1 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
Chmp7Q8R1T1 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Chmp7Q8R1T1 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Chmp7Q8R1T1 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Chmp7Q8R1T1 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Chmp7Q8R1T1 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC22.77■■□□□ 1.24
Chmp7Q8R1T1 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Chmp7Q8R1T1 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC22.77■■□□□ 1.24
Chmp7Q8R1T1 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC22.77■■□□□ 1.24
Chmp7Q8R1T1 AA414768-201ENSMUST00000121924 1257 ntBASIC22.77■■□□□ 1.24
Chmp7Q8R1T1 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Chmp7Q8R1T1 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC22.77■■□□□ 1.24
Chmp7Q8R1T1 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC22.77■■□□□ 1.24
Chmp7Q8R1T1 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC22.77■■□□□ 1.24
Chmp7Q8R1T1 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Chmp7Q8R1T1 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC22.77■■□□□ 1.24
Chmp7Q8R1T1 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC22.77■■□□□ 1.24
Chmp7Q8R1T1 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC22.77■■□□□ 1.24
Chmp7Q8R1T1 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Chmp7Q8R1T1 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Chmp7Q8R1T1 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC22.76■■□□□ 1.23
Chmp7Q8R1T1 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC22.76■■□□□ 1.23
Chmp7Q8R1T1 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Chmp7Q8R1T1 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Chmp7Q8R1T1 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
Chmp7Q8R1T1 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Chmp7Q8R1T1 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
Chmp7Q8R1T1 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
Chmp7Q8R1T1 AC134329.2-201ENSMUST00000217897 428 ntBASIC22.76■■□□□ 1.23
Chmp7Q8R1T1 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Chmp7Q8R1T1 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
Chmp7Q8R1T1 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Chmp7Q8R1T1 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Chmp7Q8R1T1 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC22.76■■□□□ 1.23
Chmp7Q8R1T1 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Chmp7Q8R1T1 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC22.76■■□□□ 1.23
Chmp7Q8R1T1 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Chmp7Q8R1T1 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC22.75■■□□□ 1.23
Chmp7Q8R1T1 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Chmp7Q8R1T1 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
Chmp7Q8R1T1 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC22.75■■□□□ 1.23
Chmp7Q8R1T1 Gm18101-201ENSMUST00000215769 548 ntBASIC22.75■■□□□ 1.23
Chmp7Q8R1T1 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC22.75■■□□□ 1.23
Chmp7Q8R1T1 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Chmp7Q8R1T1 Notumos-201ENSMUST00000151998 2659 ntBASIC22.75■■□□□ 1.23
Chmp7Q8R1T1 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC22.75■■□□□ 1.23
Chmp7Q8R1T1 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC22.75■■□□□ 1.23
Chmp7Q8R1T1 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Chmp7Q8R1T1 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
Chmp7Q8R1T1 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Chmp7Q8R1T1 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Chmp7Q8R1T1 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC22.74■■□□□ 1.23
Chmp7Q8R1T1 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms