Protein–RNA interactions for Protein: Q8R1J3

Zcchc9, Zinc finger CCHC domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zcchc9Q8R1J3 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Zcchc9Q8R1J3 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Zcchc9Q8R1J3 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Zcchc9Q8R1J3 Arhgef4-208ENSMUST00000211073 171 ntBASIC17.76■□□□□ 0.43
Zcchc9Q8R1J3 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Zcchc9Q8R1J3 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Zcchc9Q8R1J3 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC17.76■□□□□ 0.43
Zcchc9Q8R1J3 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Zcchc9Q8R1J3 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Zcchc9Q8R1J3 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Zcchc9Q8R1J3 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Zcchc9Q8R1J3 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Zcchc9Q8R1J3 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Zcchc9Q8R1J3 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Zcchc9Q8R1J3 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
Zcchc9Q8R1J3 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Zcchc9Q8R1J3 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC17.75■□□□□ 0.43
Zcchc9Q8R1J3 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Zcchc9Q8R1J3 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Zcchc9Q8R1J3 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Zcchc9Q8R1J3 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
Zcchc9Q8R1J3 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Zcchc9Q8R1J3 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Zcchc9Q8R1J3 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
Zcchc9Q8R1J3 Gm42545-201ENSMUST00000202755 922 ntBASIC17.75■□□□□ 0.43
Zcchc9Q8R1J3 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Zcchc9Q8R1J3 Gm30025-201ENSMUST00000218555 728 ntBASIC17.75■□□□□ 0.43
Zcchc9Q8R1J3 Gm18025-201ENSMUST00000221733 862 ntBASIC17.75■□□□□ 0.43
Zcchc9Q8R1J3 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Zcchc9Q8R1J3 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Zcchc9Q8R1J3 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Zcchc9Q8R1J3 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Zcchc9Q8R1J3 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
Zcchc9Q8R1J3 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Zcchc9Q8R1J3 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Zcchc9Q8R1J3 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Zcchc9Q8R1J3 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Zcchc9Q8R1J3 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Zcchc9Q8R1J3 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Zcchc9Q8R1J3 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Zcchc9Q8R1J3 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Zcchc9Q8R1J3 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Zcchc9Q8R1J3 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Zcchc9Q8R1J3 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC17.74■□□□□ 0.43
Zcchc9Q8R1J3 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Zcchc9Q8R1J3 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Zcchc9Q8R1J3 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
Zcchc9Q8R1J3 Gm15375-201ENSMUST00000119510 849 ntBASIC17.74■□□□□ 0.43
Zcchc9Q8R1J3 Gm16042-201ENSMUST00000204813 1247 ntBASIC17.74■□□□□ 0.43
Zcchc9Q8R1J3 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC17.74■□□□□ 0.43
Zcchc9Q8R1J3 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Zcchc9Q8R1J3 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Zcchc9Q8R1J3 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Zcchc9Q8R1J3 Gm45560-201ENSMUST00000211492 1472 ntBASIC17.74■□□□□ 0.43
Zcchc9Q8R1J3 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Zcchc9Q8R1J3 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Zcchc9Q8R1J3 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Zcchc9Q8R1J3 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Zcchc9Q8R1J3 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Zcchc9Q8R1J3 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Zcchc9Q8R1J3 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Zcchc9Q8R1J3 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Zcchc9Q8R1J3 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Zcchc9Q8R1J3 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Zcchc9Q8R1J3 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Zcchc9Q8R1J3 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC17.73■□□□□ 0.43
Zcchc9Q8R1J3 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Zcchc9Q8R1J3 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC17.73■□□□□ 0.43
Zcchc9Q8R1J3 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Zcchc9Q8R1J3 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Zcchc9Q8R1J3 AC124581.1-201ENSMUST00000225416 1399 ntBASIC17.73■□□□□ 0.43
Zcchc9Q8R1J3 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Zcchc9Q8R1J3 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Zcchc9Q8R1J3 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Zcchc9Q8R1J3 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Zcchc9Q8R1J3 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Zcchc9Q8R1J3 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC17.72■□□□□ 0.43
Zcchc9Q8R1J3 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
Zcchc9Q8R1J3 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Zcchc9Q8R1J3 Gm37811-201ENSMUST00000192416 2601 ntBASIC17.72■□□□□ 0.43
Zcchc9Q8R1J3 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC17.72■□□□□ 0.43
Zcchc9Q8R1J3 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Zcchc9Q8R1J3 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Zcchc9Q8R1J3 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Zcchc9Q8R1J3 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC17.72■□□□□ 0.43
Zcchc9Q8R1J3 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC17.72■□□□□ 0.43
Zcchc9Q8R1J3 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Zcchc9Q8R1J3 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
Zcchc9Q8R1J3 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Zcchc9Q8R1J3 Dmtn-210ENSMUST00000228824 2377 ntBASIC17.72■□□□□ 0.43
Zcchc9Q8R1J3 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Zcchc9Q8R1J3 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Zcchc9Q8R1J3 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Zcchc9Q8R1J3 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Zcchc9Q8R1J3 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Zcchc9Q8R1J3 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Zcchc9Q8R1J3 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Zcchc9Q8R1J3 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Zcchc9Q8R1J3 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Zcchc9Q8R1J3 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms