Protein–RNA interactions for Protein: Q8R0S1

Atf7, Cyclic AMP-dependent transcription factor ATF-7, mousemouse

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf7Q8R0S1 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Atf7Q8R0S1 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Atf7Q8R0S1 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Atf7Q8R0S1 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Atf7Q8R0S1 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Atf7Q8R0S1 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Atf7Q8R0S1 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Atf7Q8R0S1 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Atf7Q8R0S1 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Atf7Q8R0S1 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Atf7Q8R0S1 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC21.04■□□□□ 0.96
Atf7Q8R0S1 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Atf7Q8R0S1 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC21.04■□□□□ 0.96
Atf7Q8R0S1 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC21.04■□□□□ 0.96
Atf7Q8R0S1 Gm12896-201ENSMUST00000118430 226 ntBASIC21.04■□□□□ 0.96
Atf7Q8R0S1 Mir2861-201ENSMUST00000175539 82 ntBASIC21.04■□□□□ 0.96
Atf7Q8R0S1 Gm8969-201ENSMUST00000199694 526 ntBASIC21.04■□□□□ 0.96
Atf7Q8R0S1 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Atf7Q8R0S1 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Atf7Q8R0S1 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Atf7Q8R0S1 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Atf7Q8R0S1 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Atf7Q8R0S1 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Atf7Q8R0S1 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC21.03■□□□□ 0.96
Atf7Q8R0S1 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Atf7Q8R0S1 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC21.03■□□□□ 0.96
Atf7Q8R0S1 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Atf7Q8R0S1 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC21.03■□□□□ 0.96
Atf7Q8R0S1 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC21.03■□□□□ 0.96
Atf7Q8R0S1 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Atf7Q8R0S1 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Atf7Q8R0S1 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC21.02■□□□□ 0.96
Atf7Q8R0S1 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Atf7Q8R0S1 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Atf7Q8R0S1 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Atf7Q8R0S1 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Atf7Q8R0S1 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Atf7Q8R0S1 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Atf7Q8R0S1 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC21.02■□□□□ 0.96
Atf7Q8R0S1 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Atf7Q8R0S1 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Atf7Q8R0S1 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Atf7Q8R0S1 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Atf7Q8R0S1 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Atf7Q8R0S1 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Atf7Q8R0S1 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Atf7Q8R0S1 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Atf7Q8R0S1 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
Atf7Q8R0S1 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Atf7Q8R0S1 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Atf7Q8R0S1 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Atf7Q8R0S1 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Atf7Q8R0S1 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC21.01■□□□□ 0.95
Atf7Q8R0S1 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Atf7Q8R0S1 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Atf7Q8R0S1 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Atf7Q8R0S1 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Atf7Q8R0S1 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC21.01■□□□□ 0.95
Atf7Q8R0S1 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Atf7Q8R0S1 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Atf7Q8R0S1 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Atf7Q8R0S1 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Atf7Q8R0S1 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Atf7Q8R0S1 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Atf7Q8R0S1 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC21■□□□□ 0.95
Atf7Q8R0S1 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
Atf7Q8R0S1 Gm12441-201ENSMUST00000121806 588 ntBASIC21■□□□□ 0.95
Atf7Q8R0S1 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC21■□□□□ 0.95
Atf7Q8R0S1 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC21■□□□□ 0.95
Atf7Q8R0S1 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Atf7Q8R0S1 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Atf7Q8R0S1 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Atf7Q8R0S1 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC21■□□□□ 0.95
Atf7Q8R0S1 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Atf7Q8R0S1 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Atf7Q8R0S1 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Atf7Q8R0S1 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
Atf7Q8R0S1 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Atf7Q8R0S1 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Atf7Q8R0S1 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Atf7Q8R0S1 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Atf7Q8R0S1 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Atf7Q8R0S1 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Atf7Q8R0S1 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Atf7Q8R0S1 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Atf7Q8R0S1 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Atf7Q8R0S1 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Atf7Q8R0S1 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Atf7Q8R0S1 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC20.99■□□□□ 0.95
Atf7Q8R0S1 Gm11249-201ENSMUST00000117071 859 ntBASIC20.99■□□□□ 0.95
Atf7Q8R0S1 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Atf7Q8R0S1 Gm29791-202ENSMUST00000207888 369 ntBASIC20.99■□□□□ 0.95
Atf7Q8R0S1 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Atf7Q8R0S1 Gm21596-201ENSMUST00000178049 1316 ntBASIC20.99■□□□□ 0.95
Atf7Q8R0S1 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Atf7Q8R0S1 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Atf7Q8R0S1 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Atf7Q8R0S1 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Atf7Q8R0S1 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Atf7Q8R0S1 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms