Protein–RNA interactions for Protein: Q8K0V4

Cnot3, CCR4-NOT transcription complex subunit 3, mousemouse

Known RBP Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cnot3Q8K0V4 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cnot3Q8K0V4 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Cnot3Q8K0V4 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Cnot3Q8K0V4 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC16.77■□□□□ 0.27
Cnot3Q8K0V4 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Cnot3Q8K0V4 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cnot3Q8K0V4 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cnot3Q8K0V4 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Cnot3Q8K0V4 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Cnot3Q8K0V4 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Cnot3Q8K0V4 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Cnot3Q8K0V4 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC16.76■□□□□ 0.27
Cnot3Q8K0V4 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cnot3Q8K0V4 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC16.76■□□□□ 0.27
Cnot3Q8K0V4 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC16.76■□□□□ 0.27
Cnot3Q8K0V4 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Cnot3Q8K0V4 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cnot3Q8K0V4 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cnot3Q8K0V4 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Cnot3Q8K0V4 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Cnot3Q8K0V4 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cnot3Q8K0V4 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cnot3Q8K0V4 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cnot3Q8K0V4 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cnot3Q8K0V4 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cnot3Q8K0V4 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Cnot3Q8K0V4 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Cnot3Q8K0V4 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cnot3Q8K0V4 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Cnot3Q8K0V4 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cnot3Q8K0V4 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cnot3Q8K0V4 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cnot3Q8K0V4 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Cnot3Q8K0V4 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Cnot3Q8K0V4 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
Cnot3Q8K0V4 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cnot3Q8K0V4 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cnot3Q8K0V4 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC16.75■□□□□ 0.27
Cnot3Q8K0V4 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Cnot3Q8K0V4 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cnot3Q8K0V4 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cnot3Q8K0V4 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cnot3Q8K0V4 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cnot3Q8K0V4 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
Cnot3Q8K0V4 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC16.75■□□□□ 0.27
Cnot3Q8K0V4 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cnot3Q8K0V4 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cnot3Q8K0V4 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
Cnot3Q8K0V4 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC16.75■□□□□ 0.27
Cnot3Q8K0V4 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cnot3Q8K0V4 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC16.75■□□□□ 0.27
Cnot3Q8K0V4 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cnot3Q8K0V4 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cnot3Q8K0V4 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cnot3Q8K0V4 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cnot3Q8K0V4 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Cnot3Q8K0V4 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cnot3Q8K0V4 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cnot3Q8K0V4 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cnot3Q8K0V4 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cnot3Q8K0V4 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cnot3Q8K0V4 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cnot3Q8K0V4 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Cnot3Q8K0V4 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Cnot3Q8K0V4 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Cnot3Q8K0V4 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cnot3Q8K0V4 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Cnot3Q8K0V4 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Cnot3Q8K0V4 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cnot3Q8K0V4 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cnot3Q8K0V4 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cnot3Q8K0V4 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cnot3Q8K0V4 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC16.74■□□□□ 0.27
Cnot3Q8K0V4 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Cnot3Q8K0V4 Gm37374-201ENSMUST00000194954 1829 ntBASIC16.74■□□□□ 0.27
Cnot3Q8K0V4 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Cnot3Q8K0V4 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cnot3Q8K0V4 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Cnot3Q8K0V4 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
Cnot3Q8K0V4 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cnot3Q8K0V4 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cnot3Q8K0V4 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC16.74■□□□□ 0.27
Cnot3Q8K0V4 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC16.74■□□□□ 0.27
Cnot3Q8K0V4 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC16.73■□□□□ 0.27
Cnot3Q8K0V4 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cnot3Q8K0V4 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cnot3Q8K0V4 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cnot3Q8K0V4 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cnot3Q8K0V4 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Cnot3Q8K0V4 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Cnot3Q8K0V4 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cnot3Q8K0V4 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cnot3Q8K0V4 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Cnot3Q8K0V4 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cnot3Q8K0V4 Gm14281-201ENSMUST00000121700 1294 ntBASIC16.73■□□□□ 0.27
Cnot3Q8K0V4 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC16.73■□□□□ 0.27
Cnot3Q8K0V4 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC16.73■□□□□ 0.27
Cnot3Q8K0V4 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cnot3Q8K0V4 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cnot3Q8K0V4 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms