Protein–RNA interactions for Protein: Q8K0T0

Rtn1, Reticulon-1, mousemouse

Predictions only

Length 780 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn1Q8K0T0 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rtn1Q8K0T0 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Rtn1Q8K0T0 Gm15375-201ENSMUST00000119510 849 ntBASIC20.56■□□□□ 0.88
Rtn1Q8K0T0 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC20.56■□□□□ 0.88
Rtn1Q8K0T0 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rtn1Q8K0T0 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rtn1Q8K0T0 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rtn1Q8K0T0 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rtn1Q8K0T0 Gm45560-201ENSMUST00000211492 1472 ntBASIC20.56■□□□□ 0.88
Rtn1Q8K0T0 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Rtn1Q8K0T0 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rtn1Q8K0T0 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rtn1Q8K0T0 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Rtn1Q8K0T0 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rtn1Q8K0T0 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Rtn1Q8K0T0 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rtn1Q8K0T0 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC20.55■□□□□ 0.88
Rtn1Q8K0T0 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rtn1Q8K0T0 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rtn1Q8K0T0 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rtn1Q8K0T0 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC20.55■□□□□ 0.88
Rtn1Q8K0T0 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rtn1Q8K0T0 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rtn1Q8K0T0 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Rtn1Q8K0T0 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rtn1Q8K0T0 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Rtn1Q8K0T0 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Rtn1Q8K0T0 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC20.54■□□□□ 0.88
Rtn1Q8K0T0 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Rtn1Q8K0T0 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC20.54■□□□□ 0.88
Rtn1Q8K0T0 Gm20760-201ENSMUST00000179197 648 ntBASIC20.54■□□□□ 0.88
Rtn1Q8K0T0 Gm18666-201ENSMUST00000190039 958 ntBASIC20.54■□□□□ 0.88
Rtn1Q8K0T0 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC20.54■□□□□ 0.88
Rtn1Q8K0T0 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rtn1Q8K0T0 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rtn1Q8K0T0 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rtn1Q8K0T0 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rtn1Q8K0T0 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rtn1Q8K0T0 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rtn1Q8K0T0 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rtn1Q8K0T0 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC20.54■□□□□ 0.88
Rtn1Q8K0T0 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rtn1Q8K0T0 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Rtn1Q8K0T0 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Rtn1Q8K0T0 Idnk-204ENSMUST00000226010 1898 ntBASIC20.54■□□□□ 0.88
Rtn1Q8K0T0 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rtn1Q8K0T0 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rtn1Q8K0T0 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rtn1Q8K0T0 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Rtn1Q8K0T0 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
Rtn1Q8K0T0 Gm27011-201ENSMUST00000182352 972 ntBASIC20.53■□□□□ 0.88
Rtn1Q8K0T0 Mir6349-201ENSMUST00000184059 97 ntBASIC20.53■□□□□ 0.88
Rtn1Q8K0T0 Gm29241-201ENSMUST00000189260 1096 ntBASIC20.53■□□□□ 0.88
Rtn1Q8K0T0 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Rtn1Q8K0T0 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rtn1Q8K0T0 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Rtn1Q8K0T0 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Rtn1Q8K0T0 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Rtn1Q8K0T0 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Rtn1Q8K0T0 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rtn1Q8K0T0 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Rtn1Q8K0T0 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rtn1Q8K0T0 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rtn1Q8K0T0 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Rtn1Q8K0T0 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC20.53■□□□□ 0.88
Rtn1Q8K0T0 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC20.53■□□□□ 0.88
Rtn1Q8K0T0 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rtn1Q8K0T0 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rtn1Q8K0T0 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rtn1Q8K0T0 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rtn1Q8K0T0 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rtn1Q8K0T0 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Rtn1Q8K0T0 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rtn1Q8K0T0 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Rtn1Q8K0T0 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rtn1Q8K0T0 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rtn1Q8K0T0 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Rtn1Q8K0T0 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Rtn1Q8K0T0 Gm10654-201ENSMUST00000098653 1633 ntBASIC20.52■□□□□ 0.88
Rtn1Q8K0T0 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC20.52■□□□□ 0.87
Rtn1Q8K0T0 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.87
Rtn1Q8K0T0 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.87
Rtn1Q8K0T0 Rarb-207ENSMUST00000225921 2756 ntBASIC20.51■□□□□ 0.87
Rtn1Q8K0T0 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC20.51■□□□□ 0.87
Rtn1Q8K0T0 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Rtn1Q8K0T0 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rtn1Q8K0T0 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC20.51■□□□□ 0.87
Rtn1Q8K0T0 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rtn1Q8K0T0 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rtn1Q8K0T0 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Rtn1Q8K0T0 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rtn1Q8K0T0 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Rtn1Q8K0T0 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC20.51■□□□□ 0.87
Rtn1Q8K0T0 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC20.51■□□□□ 0.87
Rtn1Q8K0T0 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rtn1Q8K0T0 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC20.51■□□□□ 0.87
Rtn1Q8K0T0 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Rtn1Q8K0T0 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Rtn1Q8K0T0 Gm37820-201ENSMUST00000194021 2147 ntBASIC20.51■□□□□ 0.87
Rtn1Q8K0T0 Nrn1-203ENSMUST00000223611 1443 ntBASIC20.51■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms