Protein–RNA interactions for Protein: Q8JZS7

Hmgcll1, 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgcll1Q8JZS7 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hmgcll1Q8JZS7 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hmgcll1Q8JZS7 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Hmgcll1Q8JZS7 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hmgcll1Q8JZS7 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Hmgcll1Q8JZS7 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hmgcll1Q8JZS7 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hmgcll1Q8JZS7 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hmgcll1Q8JZS7 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hmgcll1Q8JZS7 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hmgcll1Q8JZS7 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hmgcll1Q8JZS7 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hmgcll1Q8JZS7 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Hmgcll1Q8JZS7 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC18.36■□□□□ 0.53
Hmgcll1Q8JZS7 Gm13401-201ENSMUST00000117074 291 ntBASIC18.36■□□□□ 0.53
Hmgcll1Q8JZS7 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Hmgcll1Q8JZS7 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Hmgcll1Q8JZS7 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Hmgcll1Q8JZS7 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Hmgcll1Q8JZS7 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Hmgcll1Q8JZS7 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Hmgcll1Q8JZS7 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Hmgcll1Q8JZS7 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Hmgcll1Q8JZS7 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC18.36■□□□□ 0.53
Hmgcll1Q8JZS7 Gm3375-201ENSMUST00000203929 796 ntBASIC18.36■□□□□ 0.53
Hmgcll1Q8JZS7 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Hmgcll1Q8JZS7 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Hmgcll1Q8JZS7 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Hmgcll1Q8JZS7 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Hmgcll1Q8JZS7 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Hmgcll1Q8JZS7 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Hmgcll1Q8JZS7 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hmgcll1Q8JZS7 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hmgcll1Q8JZS7 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hmgcll1Q8JZS7 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hmgcll1Q8JZS7 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hmgcll1Q8JZS7 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hmgcll1Q8JZS7 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hmgcll1Q8JZS7 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Hmgcll1Q8JZS7 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC18.35■□□□□ 0.53
Hmgcll1Q8JZS7 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC18.35■□□□□ 0.53
Hmgcll1Q8JZS7 Gm29791-202ENSMUST00000207888 369 ntBASIC18.35■□□□□ 0.53
Hmgcll1Q8JZS7 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hmgcll1Q8JZS7 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Hmgcll1Q8JZS7 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
Hmgcll1Q8JZS7 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Hmgcll1Q8JZS7 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hmgcll1Q8JZS7 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
Hmgcll1Q8JZS7 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Hmgcll1Q8JZS7 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
Hmgcll1Q8JZS7 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Hmgcll1Q8JZS7 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Hmgcll1Q8JZS7 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC18.34■□□□□ 0.53
Hmgcll1Q8JZS7 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC18.34■□□□□ 0.53
Hmgcll1Q8JZS7 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Hmgcll1Q8JZS7 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC18.34■□□□□ 0.53
Hmgcll1Q8JZS7 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Hmgcll1Q8JZS7 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Hmgcll1Q8JZS7 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Hmgcll1Q8JZS7 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Hmgcll1Q8JZS7 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC18.33■□□□□ 0.53
Hmgcll1Q8JZS7 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Hmgcll1Q8JZS7 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Hmgcll1Q8JZS7 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC18.33■□□□□ 0.52
Hmgcll1Q8JZS7 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Hmgcll1Q8JZS7 Gm4974-201ENSMUST00000209974 875 ntBASIC18.33■□□□□ 0.52
Hmgcll1Q8JZS7 AC135963.1-201ENSMUST00000211640 717 ntBASIC18.33■□□□□ 0.52
Hmgcll1Q8JZS7 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Hmgcll1Q8JZS7 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Hmgcll1Q8JZS7 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Hmgcll1Q8JZS7 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Hmgcll1Q8JZS7 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Hmgcll1Q8JZS7 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Hmgcll1Q8JZS7 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Hmgcll1Q8JZS7 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Hmgcll1Q8JZS7 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Hmgcll1Q8JZS7 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Hmgcll1Q8JZS7 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Hmgcll1Q8JZS7 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC18.33■□□□□ 0.52
Hmgcll1Q8JZS7 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Hmgcll1Q8JZS7 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Hmgcll1Q8JZS7 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Hmgcll1Q8JZS7 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Hmgcll1Q8JZS7 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC18.32■□□□□ 0.52
Hmgcll1Q8JZS7 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Hmgcll1Q8JZS7 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Hmgcll1Q8JZS7 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC18.32■□□□□ 0.52
Hmgcll1Q8JZS7 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC18.32■□□□□ 0.52
Hmgcll1Q8JZS7 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Hmgcll1Q8JZS7 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Hmgcll1Q8JZS7 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Hmgcll1Q8JZS7 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Hmgcll1Q8JZS7 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Hmgcll1Q8JZS7 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Hmgcll1Q8JZS7 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Hmgcll1Q8JZS7 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Hmgcll1Q8JZS7 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Hmgcll1Q8JZS7 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC18.31■□□□□ 0.52
Hmgcll1Q8JZS7 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Hmgcll1Q8JZS7 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms