Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rfwd3Q8CIK8 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Rfwd3Q8CIK8 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC16.75■□□□□ 0.27
Rfwd3Q8CIK8 Rarb-207ENSMUST00000225921 2756 ntBASIC16.75■□□□□ 0.27
Rfwd3Q8CIK8 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC16.75■□□□□ 0.27
Rfwd3Q8CIK8 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Rfwd3Q8CIK8 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rfwd3Q8CIK8 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC16.75■□□□□ 0.27
Rfwd3Q8CIK8 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Rfwd3Q8CIK8 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC16.75■□□□□ 0.27
Rfwd3Q8CIK8 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rfwd3Q8CIK8 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rfwd3Q8CIK8 Zfp783-201ENSMUST00000095946 670 ntBASIC16.75■□□□□ 0.27
Rfwd3Q8CIK8 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rfwd3Q8CIK8 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rfwd3Q8CIK8 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rfwd3Q8CIK8 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rfwd3Q8CIK8 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rfwd3Q8CIK8 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rfwd3Q8CIK8 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rfwd3Q8CIK8 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rfwd3Q8CIK8 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rfwd3Q8CIK8 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rfwd3Q8CIK8 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rfwd3Q8CIK8 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rfwd3Q8CIK8 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rfwd3Q8CIK8 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Rfwd3Q8CIK8 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Rfwd3Q8CIK8 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rfwd3Q8CIK8 Gm38285-201ENSMUST00000192928 922 ntBASIC16.74■□□□□ 0.27
Rfwd3Q8CIK8 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rfwd3Q8CIK8 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rfwd3Q8CIK8 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rfwd3Q8CIK8 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rfwd3Q8CIK8 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rfwd3Q8CIK8 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rfwd3Q8CIK8 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rfwd3Q8CIK8 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Rfwd3Q8CIK8 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rfwd3Q8CIK8 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Rfwd3Q8CIK8 Gm38345-201ENSMUST00000192635 1748 ntBASIC16.73■□□□□ 0.27
Rfwd3Q8CIK8 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Rfwd3Q8CIK8 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Rfwd3Q8CIK8 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rfwd3Q8CIK8 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rfwd3Q8CIK8 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rfwd3Q8CIK8 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rfwd3Q8CIK8 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC16.73■□□□□ 0.27
Rfwd3Q8CIK8 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Rfwd3Q8CIK8 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rfwd3Q8CIK8 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rfwd3Q8CIK8 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rfwd3Q8CIK8 Gm37856-201ENSMUST00000191634 999 ntBASIC16.73■□□□□ 0.27
Rfwd3Q8CIK8 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC16.73■□□□□ 0.27
Rfwd3Q8CIK8 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rfwd3Q8CIK8 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rfwd3Q8CIK8 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rfwd3Q8CIK8 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rfwd3Q8CIK8 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rfwd3Q8CIK8 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rfwd3Q8CIK8 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rfwd3Q8CIK8 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rfwd3Q8CIK8 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rfwd3Q8CIK8 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rfwd3Q8CIK8 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rfwd3Q8CIK8 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rfwd3Q8CIK8 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Rfwd3Q8CIK8 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Rfwd3Q8CIK8 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rfwd3Q8CIK8 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rfwd3Q8CIK8 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rfwd3Q8CIK8 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rfwd3Q8CIK8 Gm11927-201ENSMUST00000118472 759 ntBASIC16.72■□□□□ 0.27
Rfwd3Q8CIK8 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Rfwd3Q8CIK8 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Rfwd3Q8CIK8 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Rfwd3Q8CIK8 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rfwd3Q8CIK8 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rfwd3Q8CIK8 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Rfwd3Q8CIK8 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rfwd3Q8CIK8 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rfwd3Q8CIK8 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rfwd3Q8CIK8 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rfwd3Q8CIK8 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rfwd3Q8CIK8 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rfwd3Q8CIK8 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rfwd3Q8CIK8 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rfwd3Q8CIK8 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rfwd3Q8CIK8 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC16.71■□□□□ 0.27
Rfwd3Q8CIK8 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rfwd3Q8CIK8 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rfwd3Q8CIK8 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rfwd3Q8CIK8 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rfwd3Q8CIK8 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rfwd3Q8CIK8 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC16.71■□□□□ 0.27
Rfwd3Q8CIK8 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rfwd3Q8CIK8 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Rfwd3Q8CIK8 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
Rfwd3Q8CIK8 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rfwd3Q8CIK8 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms