Protein–RNA interactions for Protein: Q8CI96

Clip4, CAP-Gly domain-containing linker protein 4, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip4Q8CI96 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Clip4Q8CI96 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Clip4Q8CI96 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Clip4Q8CI96 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Clip4Q8CI96 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Clip4Q8CI96 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Clip4Q8CI96 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Clip4Q8CI96 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Clip4Q8CI96 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Clip4Q8CI96 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Clip4Q8CI96 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Clip4Q8CI96 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Clip4Q8CI96 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Clip4Q8CI96 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC17.93■□□□□ 0.46
Clip4Q8CI96 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Clip4Q8CI96 Gm27011-201ENSMUST00000182352 972 ntBASIC17.93■□□□□ 0.46
Clip4Q8CI96 Rab3c-203ENSMUST00000224180 967 ntBASIC17.93■□□□□ 0.46
Clip4Q8CI96 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Clip4Q8CI96 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Clip4Q8CI96 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Clip4Q8CI96 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Clip4Q8CI96 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Clip4Q8CI96 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Clip4Q8CI96 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Clip4Q8CI96 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
Clip4Q8CI96 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Clip4Q8CI96 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Clip4Q8CI96 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Clip4Q8CI96 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Clip4Q8CI96 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC17.92■□□□□ 0.46
Clip4Q8CI96 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Clip4Q8CI96 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Clip4Q8CI96 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Clip4Q8CI96 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Clip4Q8CI96 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC17.92■□□□□ 0.46
Clip4Q8CI96 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC17.92■□□□□ 0.46
Clip4Q8CI96 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Clip4Q8CI96 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Clip4Q8CI96 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Clip4Q8CI96 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Clip4Q8CI96 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Clip4Q8CI96 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Clip4Q8CI96 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Clip4Q8CI96 Gm43672-201ENSMUST00000199072 1731 ntBASIC17.92■□□□□ 0.46
Clip4Q8CI96 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Clip4Q8CI96 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC17.91■□□□□ 0.46
Clip4Q8CI96 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Clip4Q8CI96 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Clip4Q8CI96 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Clip4Q8CI96 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Clip4Q8CI96 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Clip4Q8CI96 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Clip4Q8CI96 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC17.91■□□□□ 0.46
Clip4Q8CI96 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Clip4Q8CI96 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Clip4Q8CI96 AC160393.1-201ENSMUST00000218378 1279 ntBASIC17.91■□□□□ 0.46
Clip4Q8CI96 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Clip4Q8CI96 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Clip4Q8CI96 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Clip4Q8CI96 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC17.91■□□□□ 0.46
Clip4Q8CI96 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC17.91■□□□□ 0.46
Clip4Q8CI96 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
Clip4Q8CI96 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Clip4Q8CI96 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Clip4Q8CI96 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Clip4Q8CI96 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Clip4Q8CI96 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Clip4Q8CI96 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Clip4Q8CI96 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC17.9■□□□□ 0.46
Clip4Q8CI96 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Clip4Q8CI96 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC17.9■□□□□ 0.46
Clip4Q8CI96 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC17.9■□□□□ 0.46
Clip4Q8CI96 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Clip4Q8CI96 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Clip4Q8CI96 Gm44672-201ENSMUST00000206944 1098 ntBASIC17.9■□□□□ 0.46
Clip4Q8CI96 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC17.9■□□□□ 0.46
Clip4Q8CI96 AC112142.1-201ENSMUST00000228796 918 ntBASIC17.9■□□□□ 0.46
Clip4Q8CI96 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC17.9■□□□□ 0.46
Clip4Q8CI96 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Clip4Q8CI96 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Clip4Q8CI96 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Clip4Q8CI96 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Clip4Q8CI96 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Clip4Q8CI96 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Clip4Q8CI96 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Clip4Q8CI96 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Clip4Q8CI96 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC17.9■□□□□ 0.46
Clip4Q8CI96 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Clip4Q8CI96 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Clip4Q8CI96 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Clip4Q8CI96 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Clip4Q8CI96 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Clip4Q8CI96 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Clip4Q8CI96 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Clip4Q8CI96 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Clip4Q8CI96 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC17.89■□□□□ 0.45
Clip4Q8CI96 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC17.89■□□□□ 0.45
Clip4Q8CI96 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC17.89■□□□□ 0.45
Clip4Q8CI96 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Clip4Q8CI96 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms