Protein–RNA interactions for Protein: Q8CDY9

Pcdhb7, Protocadherin beta 7, mousemouse

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb7Q8CDY9 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdhb7Q8CDY9 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdhb7Q8CDY9 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdhb7Q8CDY9 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdhb7Q8CDY9 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdhb7Q8CDY9 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC17.88■□□□□ 0.45
Pcdhb7Q8CDY9 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Pcdhb7Q8CDY9 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdhb7Q8CDY9 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdhb7Q8CDY9 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdhb7Q8CDY9 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdhb7Q8CDY9 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC17.87■□□□□ 0.45
Pcdhb7Q8CDY9 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdhb7Q8CDY9 AC121961.1-201ENSMUST00000218594 1779 ntBASIC17.87■□□□□ 0.45
Pcdhb7Q8CDY9 Gm38308-201ENSMUST00000194934 1809 ntBASIC17.87■□□□□ 0.45
Pcdhb7Q8CDY9 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdhb7Q8CDY9 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC17.87■□□□□ 0.45
Pcdhb7Q8CDY9 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
Pcdhb7Q8CDY9 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC17.87■□□□□ 0.45
Pcdhb7Q8CDY9 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC17.87■□□□□ 0.45
Pcdhb7Q8CDY9 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
Pcdhb7Q8CDY9 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
Pcdhb7Q8CDY9 Gm37179-201ENSMUST00000194862 823 ntBASIC17.87■□□□□ 0.45
Pcdhb7Q8CDY9 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC17.87■□□□□ 0.45
Pcdhb7Q8CDY9 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Pcdhb7Q8CDY9 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdhb7Q8CDY9 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdhb7Q8CDY9 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC17.87■□□□□ 0.45
Pcdhb7Q8CDY9 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdhb7Q8CDY9 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdhb7Q8CDY9 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhb7Q8CDY9 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhb7Q8CDY9 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhb7Q8CDY9 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhb7Q8CDY9 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhb7Q8CDY9 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhb7Q8CDY9 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhb7Q8CDY9 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhb7Q8CDY9 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC17.86■□□□□ 0.45
Pcdhb7Q8CDY9 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC17.86■□□□□ 0.45
Pcdhb7Q8CDY9 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhb7Q8CDY9 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhb7Q8CDY9 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhb7Q8CDY9 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhb7Q8CDY9 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhb7Q8CDY9 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhb7Q8CDY9 Gm37563-201ENSMUST00000192580 1513 ntBASIC17.86■□□□□ 0.45
Pcdhb7Q8CDY9 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhb7Q8CDY9 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhb7Q8CDY9 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhb7Q8CDY9 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhb7Q8CDY9 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhb7Q8CDY9 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhb7Q8CDY9 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdhb7Q8CDY9 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC17.85■□□□□ 0.45
Pcdhb7Q8CDY9 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC17.85■□□□□ 0.45
Pcdhb7Q8CDY9 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdhb7Q8CDY9 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdhb7Q8CDY9 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdhb7Q8CDY9 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdhb7Q8CDY9 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdhb7Q8CDY9 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdhb7Q8CDY9 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Pcdhb7Q8CDY9 AC164629.5-201ENSMUST00000220387 632 ntBASIC17.85■□□□□ 0.45
Pcdhb7Q8CDY9 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdhb7Q8CDY9 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdhb7Q8CDY9 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdhb7Q8CDY9 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdhb7Q8CDY9 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhb7Q8CDY9 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhb7Q8CDY9 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhb7Q8CDY9 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhb7Q8CDY9 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
Pcdhb7Q8CDY9 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhb7Q8CDY9 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhb7Q8CDY9 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhb7Q8CDY9 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhb7Q8CDY9 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Pcdhb7Q8CDY9 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhb7Q8CDY9 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhb7Q8CDY9 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Pcdhb7Q8CDY9 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Pcdhb7Q8CDY9 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Pcdhb7Q8CDY9 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Pcdhb7Q8CDY9 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Pcdhb7Q8CDY9 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Pcdhb7Q8CDY9 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdhb7Q8CDY9 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdhb7Q8CDY9 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdhb7Q8CDY9 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdhb7Q8CDY9 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Pcdhb7Q8CDY9 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Pcdhb7Q8CDY9 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC17.83■□□□□ 0.44
Pcdhb7Q8CDY9 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC17.83■□□□□ 0.44
Pcdhb7Q8CDY9 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Pcdhb7Q8CDY9 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdhb7Q8CDY9 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Pcdhb7Q8CDY9 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdhb7Q8CDY9 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdhb7Q8CDY9 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms