Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Vcpip1Q8CDG3 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Vcpip1Q8CDG3 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Vcpip1Q8CDG3 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Vcpip1Q8CDG3 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Vcpip1Q8CDG3 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Vcpip1Q8CDG3 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Vcpip1Q8CDG3 Gm7290-201ENSMUST00000104990 617 ntBASIC19.12■□□□□ 0.65
Vcpip1Q8CDG3 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Vcpip1Q8CDG3 Gm12918-201ENSMUST00000120234 636 ntBASIC19.12■□□□□ 0.65
Vcpip1Q8CDG3 Gm15710-201ENSMUST00000121821 636 ntBASIC19.12■□□□□ 0.65
Vcpip1Q8CDG3 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Vcpip1Q8CDG3 Gm5075-201ENSMUST00000196916 622 ntBASIC19.12■□□□□ 0.65
Vcpip1Q8CDG3 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Vcpip1Q8CDG3 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Vcpip1Q8CDG3 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
Vcpip1Q8CDG3 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC19.12■□□□□ 0.65
Vcpip1Q8CDG3 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC19.12■□□□□ 0.65
Vcpip1Q8CDG3 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC19.12■□□□□ 0.65
Vcpip1Q8CDG3 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Vcpip1Q8CDG3 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Vcpip1Q8CDG3 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Vcpip1Q8CDG3 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Vcpip1Q8CDG3 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Vcpip1Q8CDG3 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Vcpip1Q8CDG3 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Vcpip1Q8CDG3 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Vcpip1Q8CDG3 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC19.11■□□□□ 0.65
Vcpip1Q8CDG3 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Vcpip1Q8CDG3 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Vcpip1Q8CDG3 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Vcpip1Q8CDG3 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC19.11■□□□□ 0.65
Vcpip1Q8CDG3 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Vcpip1Q8CDG3 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Vcpip1Q8CDG3 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
Vcpip1Q8CDG3 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC19.11■□□□□ 0.65
Vcpip1Q8CDG3 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC19.11■□□□□ 0.65
Vcpip1Q8CDG3 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
Vcpip1Q8CDG3 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Vcpip1Q8CDG3 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC19.11■□□□□ 0.65
Vcpip1Q8CDG3 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Vcpip1Q8CDG3 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Vcpip1Q8CDG3 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Vcpip1Q8CDG3 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Vcpip1Q8CDG3 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
Vcpip1Q8CDG3 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC19.1■□□□□ 0.65
Vcpip1Q8CDG3 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Vcpip1Q8CDG3 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Vcpip1Q8CDG3 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Vcpip1Q8CDG3 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Vcpip1Q8CDG3 Gm13509-201ENSMUST00000119733 1308 ntBASIC19.1■□□□□ 0.65
Vcpip1Q8CDG3 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Vcpip1Q8CDG3 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Vcpip1Q8CDG3 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Vcpip1Q8CDG3 Gm8969-201ENSMUST00000199694 526 ntBASIC19.1■□□□□ 0.65
Vcpip1Q8CDG3 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Vcpip1Q8CDG3 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Vcpip1Q8CDG3 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
Vcpip1Q8CDG3 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Vcpip1Q8CDG3 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC19.1■□□□□ 0.65
Vcpip1Q8CDG3 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Vcpip1Q8CDG3 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Vcpip1Q8CDG3 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC19.1■□□□□ 0.65
Vcpip1Q8CDG3 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Vcpip1Q8CDG3 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Vcpip1Q8CDG3 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Vcpip1Q8CDG3 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Vcpip1Q8CDG3 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Vcpip1Q8CDG3 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Vcpip1Q8CDG3 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Vcpip1Q8CDG3 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC19.09■□□□□ 0.65
Vcpip1Q8CDG3 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Vcpip1Q8CDG3 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Vcpip1Q8CDG3 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Vcpip1Q8CDG3 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC19.09■□□□□ 0.65
Vcpip1Q8CDG3 Gm42555-201ENSMUST00000199304 1039 ntBASIC19.09■□□□□ 0.65
Vcpip1Q8CDG3 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Vcpip1Q8CDG3 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC19.09■□□□□ 0.65
Vcpip1Q8CDG3 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Vcpip1Q8CDG3 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC19.09■□□□□ 0.65
Vcpip1Q8CDG3 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Vcpip1Q8CDG3 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Vcpip1Q8CDG3 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
Vcpip1Q8CDG3 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC19.08■□□□□ 0.65
Vcpip1Q8CDG3 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Vcpip1Q8CDG3 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Vcpip1Q8CDG3 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Vcpip1Q8CDG3 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Vcpip1Q8CDG3 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Vcpip1Q8CDG3 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Vcpip1Q8CDG3 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Vcpip1Q8CDG3 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Vcpip1Q8CDG3 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Vcpip1Q8CDG3 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Vcpip1Q8CDG3 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Vcpip1Q8CDG3 Idnk-204ENSMUST00000226010 1898 ntBASIC19.07■□□□□ 0.64
Vcpip1Q8CDG3 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Vcpip1Q8CDG3 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Vcpip1Q8CDG3 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Vcpip1Q8CDG3 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms