Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Lysmd4Q8CC84 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Lysmd4Q8CC84 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Lysmd4Q8CC84 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Lysmd4Q8CC84 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Lysmd4Q8CC84 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Lysmd4Q8CC84 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC16.02■□□□□ 0.16
Lysmd4Q8CC84 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Lysmd4Q8CC84 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Lysmd4Q8CC84 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Lysmd4Q8CC84 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Lysmd4Q8CC84 Cdc34b-202ENSMUST00000188741 1252 ntBASIC16.02■□□□□ 0.16
Lysmd4Q8CC84 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Lysmd4Q8CC84 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC16.02■□□□□ 0.16
Lysmd4Q8CC84 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Lysmd4Q8CC84 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Lysmd4Q8CC84 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Lysmd4Q8CC84 Gm37563-201ENSMUST00000192580 1513 ntBASIC16.02■□□□□ 0.15
Lysmd4Q8CC84 Gm10461-201ENSMUST00000202073 4786 ntBASIC16.02■□□□□ 0.15
Lysmd4Q8CC84 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Lysmd4Q8CC84 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Lysmd4Q8CC84 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC16.02■□□□□ 0.15
Lysmd4Q8CC84 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Lysmd4Q8CC84 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Lysmd4Q8CC84 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC16.02■□□□□ 0.15
Lysmd4Q8CC84 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Lysmd4Q8CC84 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Lysmd4Q8CC84 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Lysmd4Q8CC84 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Lysmd4Q8CC84 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC16.01■□□□□ 0.15
Lysmd4Q8CC84 Gm44544-201ENSMUST00000207052 1844 ntBASIC16.01■□□□□ 0.15
Lysmd4Q8CC84 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Lysmd4Q8CC84 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Lysmd4Q8CC84 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Lysmd4Q8CC84 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Lysmd4Q8CC84 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Lysmd4Q8CC84 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Lysmd4Q8CC84 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Lysmd4Q8CC84 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Lysmd4Q8CC84 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Lysmd4Q8CC84 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Lysmd4Q8CC84 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Lysmd4Q8CC84 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Lysmd4Q8CC84 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Lysmd4Q8CC84 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Lysmd4Q8CC84 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Lysmd4Q8CC84 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Lysmd4Q8CC84 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Lysmd4Q8CC84 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC16■□□□□ 0.15
Lysmd4Q8CC84 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Lysmd4Q8CC84 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC16■□□□□ 0.15
Lysmd4Q8CC84 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Lysmd4Q8CC84 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Lysmd4Q8CC84 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Lysmd4Q8CC84 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC16■□□□□ 0.15
Lysmd4Q8CC84 Gm43060-201ENSMUST00000200621 289 ntBASIC16■□□□□ 0.15
Lysmd4Q8CC84 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC16■□□□□ 0.15
Lysmd4Q8CC84 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Lysmd4Q8CC84 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC16■□□□□ 0.15
Lysmd4Q8CC84 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC16■□□□□ 0.15
Lysmd4Q8CC84 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Lysmd4Q8CC84 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Lysmd4Q8CC84 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Lysmd4Q8CC84 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC15.99■□□□□ 0.15
Lysmd4Q8CC84 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Lysmd4Q8CC84 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Lysmd4Q8CC84 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Lysmd4Q8CC84 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Lysmd4Q8CC84 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Lysmd4Q8CC84 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Lysmd4Q8CC84 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Lysmd4Q8CC84 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Lysmd4Q8CC84 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Lysmd4Q8CC84 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Lysmd4Q8CC84 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC15.99■□□□□ 0.15
Lysmd4Q8CC84 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Lysmd4Q8CC84 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Lysmd4Q8CC84 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Lysmd4Q8CC84 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Lysmd4Q8CC84 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Lysmd4Q8CC84 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Lysmd4Q8CC84 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Lysmd4Q8CC84 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Lysmd4Q8CC84 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Lysmd4Q8CC84 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC15.98■□□□□ 0.15
Lysmd4Q8CC84 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Lysmd4Q8CC84 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Lysmd4Q8CC84 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC15.98■□□□□ 0.15
Lysmd4Q8CC84 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC15.98■□□□□ 0.15
Lysmd4Q8CC84 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Lysmd4Q8CC84 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Lysmd4Q8CC84 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Lysmd4Q8CC84 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC15.98■□□□□ 0.15
Lysmd4Q8CC84 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Lysmd4Q8CC84 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Lysmd4Q8CC84 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Lysmd4Q8CC84 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Lysmd4Q8CC84 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Lysmd4Q8CC84 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Lysmd4Q8CC84 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms