Protein–RNA interactions for Protein: Q8C2E4

Ptcd1, Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

Known RBP Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1Q8C2E4 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
Ptcd1Q8C2E4 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Ptcd1Q8C2E4 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Ptcd1Q8C2E4 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Ptcd1Q8C2E4 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC21.98■■□□□ 1.11
Ptcd1Q8C2E4 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Ptcd1Q8C2E4 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Ptcd1Q8C2E4 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Ptcd1Q8C2E4 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Ptcd1Q8C2E4 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Ptcd1Q8C2E4 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
Ptcd1Q8C2E4 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Ptcd1Q8C2E4 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Ptcd1Q8C2E4 Gm12085-201ENSMUST00000119263 940 ntBASIC21.97■■□□□ 1.11
Ptcd1Q8C2E4 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC21.97■■□□□ 1.11
Ptcd1Q8C2E4 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC21.97■■□□□ 1.11
Ptcd1Q8C2E4 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Ptcd1Q8C2E4 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Ptcd1Q8C2E4 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Ptcd1Q8C2E4 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Ptcd1Q8C2E4 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Ptcd1Q8C2E4 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC21.96■■□□□ 1.11
Ptcd1Q8C2E4 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Ptcd1Q8C2E4 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC21.96■■□□□ 1.11
Ptcd1Q8C2E4 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Ptcd1Q8C2E4 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Ptcd1Q8C2E4 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Ptcd1Q8C2E4 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Ptcd1Q8C2E4 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC21.96■■□□□ 1.11
Ptcd1Q8C2E4 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Ptcd1Q8C2E4 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Ptcd1Q8C2E4 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Ptcd1Q8C2E4 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Ptcd1Q8C2E4 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
Ptcd1Q8C2E4 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Ptcd1Q8C2E4 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC21.95■■□□□ 1.1
Ptcd1Q8C2E4 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
Ptcd1Q8C2E4 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Ptcd1Q8C2E4 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Ptcd1Q8C2E4 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Ptcd1Q8C2E4 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Ptcd1Q8C2E4 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Ptcd1Q8C2E4 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC21.95■■□□□ 1.1
Ptcd1Q8C2E4 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Ptcd1Q8C2E4 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Ptcd1Q8C2E4 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
Ptcd1Q8C2E4 Gm6627-201ENSMUST00000218299 2386 ntBASIC21.94■■□□□ 1.1
Ptcd1Q8C2E4 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Ptcd1Q8C2E4 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
Ptcd1Q8C2E4 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Ptcd1Q8C2E4 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
Ptcd1Q8C2E4 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Ptcd1Q8C2E4 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Ptcd1Q8C2E4 Gm2274-201ENSMUST00000184539 609 ntBASIC21.94■■□□□ 1.1
Ptcd1Q8C2E4 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC21.94■■□□□ 1.1
Ptcd1Q8C2E4 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
Ptcd1Q8C2E4 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Ptcd1Q8C2E4 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Ptcd1Q8C2E4 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Ptcd1Q8C2E4 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC21.93■■□□□ 1.1
Ptcd1Q8C2E4 Gm43353-201ENSMUST00000199224 1295 ntBASIC21.93■■□□□ 1.1
Ptcd1Q8C2E4 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
Ptcd1Q8C2E4 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Ptcd1Q8C2E4 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
Ptcd1Q8C2E4 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Ptcd1Q8C2E4 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Ptcd1Q8C2E4 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC21.92■■□□□ 1.1
Ptcd1Q8C2E4 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC21.92■■□□□ 1.1
Ptcd1Q8C2E4 Gm22697-201ENSMUST00000175194 63 ntBASIC21.92■■□□□ 1.1
Ptcd1Q8C2E4 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC21.92■■□□□ 1.1
Ptcd1Q8C2E4 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Ptcd1Q8C2E4 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Ptcd1Q8C2E4 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
Ptcd1Q8C2E4 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Ptcd1Q8C2E4 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Ptcd1Q8C2E4 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC21.91■■□□□ 1.1
Ptcd1Q8C2E4 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC21.91■■□□□ 1.1
Ptcd1Q8C2E4 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Ptcd1Q8C2E4 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Ptcd1Q8C2E4 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
Ptcd1Q8C2E4 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
Ptcd1Q8C2E4 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Ptcd1Q8C2E4 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Ptcd1Q8C2E4 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Ptcd1Q8C2E4 Gm7284-201ENSMUST00000131667 944 ntBASIC21.9■■□□□ 1.1
Ptcd1Q8C2E4 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC21.9■■□□□ 1.1
Ptcd1Q8C2E4 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC21.9■■□□□ 1.1
Ptcd1Q8C2E4 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Ptcd1Q8C2E4 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Ptcd1Q8C2E4 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Ptcd1Q8C2E4 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Ptcd1Q8C2E4 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
Ptcd1Q8C2E4 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
Ptcd1Q8C2E4 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Ptcd1Q8C2E4 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Ptcd1Q8C2E4 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Ptcd1Q8C2E4 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC21.9■■□□□ 1.1
Ptcd1Q8C2E4 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Ptcd1Q8C2E4 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
Ptcd1Q8C2E4 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms