Protein–RNA interactions for Protein: Q8C1M2

Znf428, Zinc finger protein 428, mousemouse

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Znf428Q8C1M2 Gm4974-201ENSMUST00000209974 875 ntBASIC21.28■■□□□ 1
Znf428Q8C1M2 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Znf428Q8C1M2 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Znf428Q8C1M2 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Znf428Q8C1M2 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Znf428Q8C1M2 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC21.28■■□□□ 1
Znf428Q8C1M2 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Znf428Q8C1M2 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Znf428Q8C1M2 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC21.28■■□□□ 1
Znf428Q8C1M2 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC21.27■■□□□ 1
Znf428Q8C1M2 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
Znf428Q8C1M2 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
Znf428Q8C1M2 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Znf428Q8C1M2 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Znf428Q8C1M2 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC21.27■■□□□ 1
Znf428Q8C1M2 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC21.27■■□□□ 1
Znf428Q8C1M2 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC21.27■■□□□ 1
Znf428Q8C1M2 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC21.27■■□□□ 1
Znf428Q8C1M2 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC21.27■■□□□ 1
Znf428Q8C1M2 Spr-ps1-201ENSMUST00000089584 605 ntBASIC21.27■■□□□ 1
Znf428Q8C1M2 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Znf428Q8C1M2 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC21.27■■□□□ 1
Znf428Q8C1M2 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
Znf428Q8C1M2 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Znf428Q8C1M2 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Znf428Q8C1M2 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Znf428Q8C1M2 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Znf428Q8C1M2 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC21.26■□□□□ 0.99
Znf428Q8C1M2 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Znf428Q8C1M2 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Znf428Q8C1M2 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Znf428Q8C1M2 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC21.26■□□□□ 0.99
Znf428Q8C1M2 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Znf428Q8C1M2 Otx2os1-206ENSMUST00000228153 787 ntBASIC21.26■□□□□ 0.99
Znf428Q8C1M2 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Znf428Q8C1M2 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Znf428Q8C1M2 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Znf428Q8C1M2 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Znf428Q8C1M2 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Znf428Q8C1M2 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Znf428Q8C1M2 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Znf428Q8C1M2 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Znf428Q8C1M2 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Znf428Q8C1M2 Gm13042-201ENSMUST00000119244 1955 ntBASIC21.25■□□□□ 0.99
Znf428Q8C1M2 Gm37820-201ENSMUST00000194021 2147 ntBASIC21.25■□□□□ 0.99
Znf428Q8C1M2 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Znf428Q8C1M2 AW822252-206ENSMUST00000208904 237 ntBASIC21.25■□□□□ 0.99
Znf428Q8C1M2 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Znf428Q8C1M2 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Znf428Q8C1M2 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Znf428Q8C1M2 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Znf428Q8C1M2 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Znf428Q8C1M2 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Znf428Q8C1M2 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Znf428Q8C1M2 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Znf428Q8C1M2 Spsb2-203ENSMUST00000112473 1322 ntBASIC21.25■□□□□ 0.99
Znf428Q8C1M2 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Znf428Q8C1M2 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC21.25■□□□□ 0.99
Znf428Q8C1M2 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Znf428Q8C1M2 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Znf428Q8C1M2 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Znf428Q8C1M2 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Znf428Q8C1M2 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC21.24■□□□□ 0.99
Znf428Q8C1M2 Gm7213-201ENSMUST00000215977 950 ntBASIC21.24■□□□□ 0.99
Znf428Q8C1M2 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Znf428Q8C1M2 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Znf428Q8C1M2 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Znf428Q8C1M2 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Znf428Q8C1M2 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Znf428Q8C1M2 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Znf428Q8C1M2 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Znf428Q8C1M2 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Znf428Q8C1M2 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC21.23■□□□□ 0.99
Znf428Q8C1M2 Gm6277-202ENSMUST00000224036 2779 ntBASIC21.23■□□□□ 0.99
Znf428Q8C1M2 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Znf428Q8C1M2 Gm13474-201ENSMUST00000122466 815 ntBASIC21.23■□□□□ 0.99
Znf428Q8C1M2 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Znf428Q8C1M2 Gm18958-201ENSMUST00000174258 762 ntBASIC21.23■□□□□ 0.99
Znf428Q8C1M2 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Znf428Q8C1M2 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Znf428Q8C1M2 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Znf428Q8C1M2 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC21.23■□□□□ 0.99
Znf428Q8C1M2 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
Znf428Q8C1M2 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Znf428Q8C1M2 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Znf428Q8C1M2 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
Znf428Q8C1M2 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Znf428Q8C1M2 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Znf428Q8C1M2 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Znf428Q8C1M2 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC21.22■□□□□ 0.99
Znf428Q8C1M2 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC21.22■□□□□ 0.99
Znf428Q8C1M2 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC21.22■□□□□ 0.99
Znf428Q8C1M2 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Znf428Q8C1M2 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Znf428Q8C1M2 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Znf428Q8C1M2 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Znf428Q8C1M2 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Znf428Q8C1M2 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Znf428Q8C1M2 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Znf428Q8C1M2 Gm5864-201ENSMUST00000202263 970 ntBASIC21.21■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms