Protein–RNA interactions for Protein: Q8C196

Cps1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, mousemouse

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cps1Q8C196 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC24.14■■□□□ 1.45
Cps1Q8C196 AC120002.2-201ENSMUST00000220205 773 ntBASIC24.14■■□□□ 1.45
Cps1Q8C196 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC24.13■■□□□ 1.45
Cps1Q8C196 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC24.13■■□□□ 1.45
Cps1Q8C196 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC24.13■■□□□ 1.45
Cps1Q8C196 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC24.13■■□□□ 1.45
Cps1Q8C196 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Cps1Q8C196 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Cps1Q8C196 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC24.13■■□□□ 1.45
Cps1Q8C196 Gm11355-201ENSMUST00000121120 306 ntBASIC24.13■■□□□ 1.45
Cps1Q8C196 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC24.13■■□□□ 1.45
Cps1Q8C196 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Cps1Q8C196 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
Cps1Q8C196 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
Cps1Q8C196 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Cps1Q8C196 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Cps1Q8C196 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Cps1Q8C196 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC24.12■■□□□ 1.45
Cps1Q8C196 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC24.12■■□□□ 1.45
Cps1Q8C196 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC24.12■■□□□ 1.45
Cps1Q8C196 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC24.12■■□□□ 1.45
Cps1Q8C196 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Cps1Q8C196 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC24.12■■□□□ 1.45
Cps1Q8C196 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC24.12■■□□□ 1.45
Cps1Q8C196 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC24.12■■□□□ 1.45
Cps1Q8C196 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC24.11■■□□□ 1.45
Cps1Q8C196 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Cps1Q8C196 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC24.11■■□□□ 1.45
Cps1Q8C196 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Cps1Q8C196 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC24.11■■□□□ 1.45
Cps1Q8C196 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Cps1Q8C196 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC24.11■■□□□ 1.45
Cps1Q8C196 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC24.11■■□□□ 1.45
Cps1Q8C196 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC24.11■■□□□ 1.45
Cps1Q8C196 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC24.11■■□□□ 1.45
Cps1Q8C196 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC24.11■■□□□ 1.45
Cps1Q8C196 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
Cps1Q8C196 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Cps1Q8C196 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
Cps1Q8C196 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC24.11■■□□□ 1.45
Cps1Q8C196 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Cps1Q8C196 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Cps1Q8C196 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Cps1Q8C196 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC24.1■■□□□ 1.45
Cps1Q8C196 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC24.1■■□□□ 1.45
Cps1Q8C196 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
Cps1Q8C196 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
Cps1Q8C196 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC24.1■■□□□ 1.45
Cps1Q8C196 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
Cps1Q8C196 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Cps1Q8C196 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
Cps1Q8C196 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
Cps1Q8C196 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC24.1■■□□□ 1.45
Cps1Q8C196 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC24.1■■□□□ 1.45
Cps1Q8C196 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC24.1■■□□□ 1.45
Cps1Q8C196 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC24.1■■□□□ 1.45
Cps1Q8C196 Gm37722-201ENSMUST00000193757 208 ntBASIC24.1■■□□□ 1.45
Cps1Q8C196 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC24.1■■□□□ 1.45
Cps1Q8C196 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC24.09■■□□□ 1.45
Cps1Q8C196 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC24.09■■□□□ 1.45
Cps1Q8C196 Actl10-202ENSMUST00000226583 1501 ntBASIC24.09■■□□□ 1.45
Cps1Q8C196 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Cps1Q8C196 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Cps1Q8C196 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Cps1Q8C196 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC24.09■■□□□ 1.45
Cps1Q8C196 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
Cps1Q8C196 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC24.09■■□□□ 1.45
Cps1Q8C196 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Cps1Q8C196 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC24.09■■□□□ 1.45
Cps1Q8C196 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC24.09■■□□□ 1.45
Cps1Q8C196 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Cps1Q8C196 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Cps1Q8C196 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC24.08■■□□□ 1.45
Cps1Q8C196 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC24.08■■□□□ 1.45
Cps1Q8C196 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Cps1Q8C196 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Cps1Q8C196 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Cps1Q8C196 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC24.08■■□□□ 1.45
Cps1Q8C196 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC24.08■■□□□ 1.45
Cps1Q8C196 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC24.08■■□□□ 1.45
Cps1Q8C196 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC24.08■■□□□ 1.45
Cps1Q8C196 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Cps1Q8C196 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC24.08■■□□□ 1.45
Cps1Q8C196 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC24.08■■□□□ 1.45
Cps1Q8C196 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Cps1Q8C196 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC24.07■■□□□ 1.44
Cps1Q8C196 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Cps1Q8C196 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Cps1Q8C196 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Cps1Q8C196 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC24.07■■□□□ 1.44
Cps1Q8C196 Gm5784-201ENSMUST00000179344 2478 ntBASIC24.07■■□□□ 1.44
Cps1Q8C196 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Cps1Q8C196 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC24.07■■□□□ 1.44
Cps1Q8C196 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Cps1Q8C196 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC24.06■■□□□ 1.44
Cps1Q8C196 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC24.06■■□□□ 1.44
Cps1Q8C196 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Cps1Q8C196 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Cps1Q8C196 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC24.05■■□□□ 1.44
Cps1Q8C196 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC24.05■■□□□ 1.44
Retrieved 100 of 76,532 protein–RNA pairs in 110.1 ms