Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sh3rf3Q8C120 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sh3rf3Q8C120 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sh3rf3Q8C120 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Sh3rf3Q8C120 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sh3rf3Q8C120 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Sh3rf3Q8C120 Zfp783-201ENSMUST00000095946 670 ntBASIC18.54■□□□□ 0.56
Sh3rf3Q8C120 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sh3rf3Q8C120 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sh3rf3Q8C120 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sh3rf3Q8C120 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Sh3rf3Q8C120 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sh3rf3Q8C120 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Sh3rf3Q8C120 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sh3rf3Q8C120 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sh3rf3Q8C120 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sh3rf3Q8C120 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC18.53■□□□□ 0.56
Sh3rf3Q8C120 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Sh3rf3Q8C120 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Sh3rf3Q8C120 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sh3rf3Q8C120 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sh3rf3Q8C120 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC18.53■□□□□ 0.56
Sh3rf3Q8C120 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sh3rf3Q8C120 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Sh3rf3Q8C120 Gm38285-201ENSMUST00000192928 922 ntBASIC18.53■□□□□ 0.56
Sh3rf3Q8C120 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sh3rf3Q8C120 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sh3rf3Q8C120 Mtag2-201ENSMUST00000058665 714 ntBASIC18.53■□□□□ 0.56
Sh3rf3Q8C120 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sh3rf3Q8C120 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC18.53■□□□□ 0.56
Sh3rf3Q8C120 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sh3rf3Q8C120 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sh3rf3Q8C120 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sh3rf3Q8C120 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC18.52■□□□□ 0.56
Sh3rf3Q8C120 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sh3rf3Q8C120 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC18.52■□□□□ 0.56
Sh3rf3Q8C120 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sh3rf3Q8C120 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sh3rf3Q8C120 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sh3rf3Q8C120 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Sh3rf3Q8C120 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sh3rf3Q8C120 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Sh3rf3Q8C120 Gm12896-201ENSMUST00000118430 226 ntBASIC18.52■□□□□ 0.56
Sh3rf3Q8C120 Gm11927-201ENSMUST00000118472 759 ntBASIC18.52■□□□□ 0.56
Sh3rf3Q8C120 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Sh3rf3Q8C120 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Sh3rf3Q8C120 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sh3rf3Q8C120 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sh3rf3Q8C120 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sh3rf3Q8C120 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Sh3rf3Q8C120 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Sh3rf3Q8C120 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC18.52■□□□□ 0.55
Sh3rf3Q8C120 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
Sh3rf3Q8C120 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Sh3rf3Q8C120 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Sh3rf3Q8C120 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Sh3rf3Q8C120 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
Sh3rf3Q8C120 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Sh3rf3Q8C120 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Sh3rf3Q8C120 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC18.51■□□□□ 0.55
Sh3rf3Q8C120 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sh3rf3Q8C120 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Sh3rf3Q8C120 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC18.51■□□□□ 0.55
Sh3rf3Q8C120 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC18.51■□□□□ 0.55
Sh3rf3Q8C120 Gm15847-201ENSMUST00000121417 1065 ntBASIC18.51■□□□□ 0.55
Sh3rf3Q8C120 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Sh3rf3Q8C120 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC18.51■□□□□ 0.55
Sh3rf3Q8C120 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sh3rf3Q8C120 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sh3rf3Q8C120 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sh3rf3Q8C120 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sh3rf3Q8C120 Flg-201ENSMUST00000050758 1488 ntBASIC18.51■□□□□ 0.55
Sh3rf3Q8C120 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sh3rf3Q8C120 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sh3rf3Q8C120 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Sh3rf3Q8C120 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sh3rf3Q8C120 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sh3rf3Q8C120 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC18.5■□□□□ 0.55
Sh3rf3Q8C120 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC18.5■□□□□ 0.55
Sh3rf3Q8C120 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sh3rf3Q8C120 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sh3rf3Q8C120 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Sh3rf3Q8C120 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sh3rf3Q8C120 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sh3rf3Q8C120 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sh3rf3Q8C120 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sh3rf3Q8C120 AC121598.2-201ENSMUST00000228376 2325 ntBASIC18.49■□□□□ 0.55
Sh3rf3Q8C120 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC18.49■□□□□ 0.55
Sh3rf3Q8C120 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC18.49■□□□□ 0.55
Sh3rf3Q8C120 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC18.49■□□□□ 0.55
Sh3rf3Q8C120 Gm2559-201ENSMUST00000201323 363 ntBASIC18.49■□□□□ 0.55
Sh3rf3Q8C120 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sh3rf3Q8C120 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Sh3rf3Q8C120 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Sh3rf3Q8C120 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sh3rf3Q8C120 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC18.49■□□□□ 0.55
Sh3rf3Q8C120 Zcchc6-207ENSMUST00000225576 2499 ntBASIC18.49■□□□□ 0.55
Sh3rf3Q8C120 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sh3rf3Q8C120 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
Sh3rf3Q8C120 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms