Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trub1Q8C0D0 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trub1Q8C0D0 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trub1Q8C0D0 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trub1Q8C0D0 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Trub1Q8C0D0 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trub1Q8C0D0 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trub1Q8C0D0 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Trub1Q8C0D0 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trub1Q8C0D0 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trub1Q8C0D0 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trub1Q8C0D0 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC18.39■□□□□ 0.53
Trub1Q8C0D0 Gm12896-201ENSMUST00000118430 226 ntBASIC18.39■□□□□ 0.53
Trub1Q8C0D0 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trub1Q8C0D0 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trub1Q8C0D0 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trub1Q8C0D0 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trub1Q8C0D0 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC18.39■□□□□ 0.53
Trub1Q8C0D0 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trub1Q8C0D0 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC18.39■□□□□ 0.53
Trub1Q8C0D0 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Trub1Q8C0D0 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Trub1Q8C0D0 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trub1Q8C0D0 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trub1Q8C0D0 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trub1Q8C0D0 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trub1Q8C0D0 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trub1Q8C0D0 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC18.38■□□□□ 0.53
Trub1Q8C0D0 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trub1Q8C0D0 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trub1Q8C0D0 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Trub1Q8C0D0 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC18.38■□□□□ 0.53
Trub1Q8C0D0 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Trub1Q8C0D0 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trub1Q8C0D0 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trub1Q8C0D0 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Trub1Q8C0D0 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trub1Q8C0D0 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC18.37■□□□□ 0.53
Trub1Q8C0D0 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trub1Q8C0D0 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Trub1Q8C0D0 Mir2861-201ENSMUST00000175539 82 ntBASIC18.37■□□□□ 0.53
Trub1Q8C0D0 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Trub1Q8C0D0 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trub1Q8C0D0 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trub1Q8C0D0 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trub1Q8C0D0 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Trub1Q8C0D0 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trub1Q8C0D0 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trub1Q8C0D0 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
Trub1Q8C0D0 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC18.37■□□□□ 0.53
Trub1Q8C0D0 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trub1Q8C0D0 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC18.36■□□□□ 0.53
Trub1Q8C0D0 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC18.36■□□□□ 0.53
Trub1Q8C0D0 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trub1Q8C0D0 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trub1Q8C0D0 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trub1Q8C0D0 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trub1Q8C0D0 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trub1Q8C0D0 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trub1Q8C0D0 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trub1Q8C0D0 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trub1Q8C0D0 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trub1Q8C0D0 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trub1Q8C0D0 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trub1Q8C0D0 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Trub1Q8C0D0 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Trub1Q8C0D0 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Trub1Q8C0D0 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC18.35■□□□□ 0.53
Trub1Q8C0D0 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Trub1Q8C0D0 Gm11249-201ENSMUST00000117071 859 ntBASIC18.35■□□□□ 0.53
Trub1Q8C0D0 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
Trub1Q8C0D0 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC18.35■□□□□ 0.53
Trub1Q8C0D0 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC18.35■□□□□ 0.53
Trub1Q8C0D0 Gm8969-201ENSMUST00000199694 526 ntBASIC18.35■□□□□ 0.53
Trub1Q8C0D0 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trub1Q8C0D0 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trub1Q8C0D0 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trub1Q8C0D0 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trub1Q8C0D0 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trub1Q8C0D0 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trub1Q8C0D0 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC18.35■□□□□ 0.53
Trub1Q8C0D0 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trub1Q8C0D0 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trub1Q8C0D0 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trub1Q8C0D0 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Trub1Q8C0D0 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trub1Q8C0D0 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trub1Q8C0D0 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trub1Q8C0D0 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC18.34■□□□□ 0.53
Trub1Q8C0D0 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trub1Q8C0D0 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trub1Q8C0D0 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trub1Q8C0D0 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Trub1Q8C0D0 Gm12441-201ENSMUST00000121806 588 ntBASIC18.34■□□□□ 0.53
Trub1Q8C0D0 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Trub1Q8C0D0 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC18.34■□□□□ 0.53
Trub1Q8C0D0 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trub1Q8C0D0 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trub1Q8C0D0 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Trub1Q8C0D0 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms