Protein–RNA interactions for Protein: Q8BYI9

Tnr, Tenascin-R, mousemouse

Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnrQ8BYI9 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
TnrQ8BYI9 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
TnrQ8BYI9 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
TnrQ8BYI9 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC23.16■■□□□ 1.3
TnrQ8BYI9 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
TnrQ8BYI9 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
TnrQ8BYI9 Gm17807-201ENSMUST00000186869 298 ntBASIC23.16■■□□□ 1.3
TnrQ8BYI9 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
TnrQ8BYI9 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
TnrQ8BYI9 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
TnrQ8BYI9 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
TnrQ8BYI9 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
TnrQ8BYI9 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
TnrQ8BYI9 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
TnrQ8BYI9 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
TnrQ8BYI9 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
TnrQ8BYI9 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
TnrQ8BYI9 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC23.15■■□□□ 1.3
TnrQ8BYI9 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
TnrQ8BYI9 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
TnrQ8BYI9 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
TnrQ8BYI9 Gm43545-201ENSMUST00000196765 2779 ntBASIC23.15■■□□□ 1.3
TnrQ8BYI9 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
TnrQ8BYI9 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
TnrQ8BYI9 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
TnrQ8BYI9 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC23.15■■□□□ 1.3
TnrQ8BYI9 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC23.15■■□□□ 1.3
TnrQ8BYI9 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
TnrQ8BYI9 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
TnrQ8BYI9 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
TnrQ8BYI9 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC23.15■■□□□ 1.3
TnrQ8BYI9 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
TnrQ8BYI9 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.3
TnrQ8BYI9 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
TnrQ8BYI9 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
TnrQ8BYI9 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC23.14■■□□□ 1.3
TnrQ8BYI9 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
TnrQ8BYI9 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC23.14■■□□□ 1.3
TnrQ8BYI9 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
TnrQ8BYI9 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC23.14■■□□□ 1.29
TnrQ8BYI9 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
TnrQ8BYI9 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
TnrQ8BYI9 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
TnrQ8BYI9 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC23.14■■□□□ 1.29
TnrQ8BYI9 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
TnrQ8BYI9 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
TnrQ8BYI9 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
TnrQ8BYI9 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
TnrQ8BYI9 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
TnrQ8BYI9 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
TnrQ8BYI9 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
TnrQ8BYI9 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
TnrQ8BYI9 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
TnrQ8BYI9 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
TnrQ8BYI9 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC23.13■■□□□ 1.29
TnrQ8BYI9 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
TnrQ8BYI9 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
TnrQ8BYI9 Gm18669-201ENSMUST00000216049 778 ntBASIC23.13■■□□□ 1.29
TnrQ8BYI9 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC23.12■■□□□ 1.29
TnrQ8BYI9 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
TnrQ8BYI9 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC23.12■■□□□ 1.29
TnrQ8BYI9 AC120002.2-201ENSMUST00000220205 773 ntBASIC23.12■■□□□ 1.29
TnrQ8BYI9 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
TnrQ8BYI9 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
TnrQ8BYI9 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
TnrQ8BYI9 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
TnrQ8BYI9 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
TnrQ8BYI9 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
TnrQ8BYI9 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
TnrQ8BYI9 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
TnrQ8BYI9 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
TnrQ8BYI9 Gm43213-201ENSMUST00000151866 1790 ntBASIC23.11■■□□□ 1.29
TnrQ8BYI9 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
TnrQ8BYI9 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
TnrQ8BYI9 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC23.11■■□□□ 1.29
TnrQ8BYI9 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
TnrQ8BYI9 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
TnrQ8BYI9 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
TnrQ8BYI9 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC23.1■■□□□ 1.29
TnrQ8BYI9 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
TnrQ8BYI9 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
TnrQ8BYI9 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
TnrQ8BYI9 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC23.1■■□□□ 1.29
TnrQ8BYI9 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
TnrQ8BYI9 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
TnrQ8BYI9 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC23.09■■□□□ 1.29
TnrQ8BYI9 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
TnrQ8BYI9 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC23.09■■□□□ 1.29
TnrQ8BYI9 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
TnrQ8BYI9 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
TnrQ8BYI9 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC23.09■■□□□ 1.29
TnrQ8BYI9 Gm3272-201ENSMUST00000181181 1229 ntBASIC23.09■■□□□ 1.29
TnrQ8BYI9 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC23.09■■□□□ 1.29
TnrQ8BYI9 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC23.09■■□□□ 1.29
TnrQ8BYI9 Gm10566-201ENSMUST00000086739 996 ntBASIC23.09■■□□□ 1.29
TnrQ8BYI9 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
TnrQ8BYI9 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
TnrQ8BYI9 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC23.09■■□□□ 1.29
TnrQ8BYI9 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
TnrQ8BYI9 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms