Protein–RNA interactions for Protein: Q8BTW8

Cdk5rap1, CDK5 regulatory subunit-associated protein 1, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap1Q8BTW8 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Cdk5rap1Q8BTW8 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC16.89■□□□□ 0.29
Cdk5rap1Q8BTW8 Gm15565-201ENSMUST00000118890 427 ntBASIC16.89■□□□□ 0.29
Cdk5rap1Q8BTW8 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC16.89■□□□□ 0.29
Cdk5rap1Q8BTW8 Krtap5-1-202ENSMUST00000188274 742 ntBASIC16.89■□□□□ 0.29
Cdk5rap1Q8BTW8 Gm21814-202ENSMUST00000203277 873 ntBASIC16.89■□□□□ 0.29
Cdk5rap1Q8BTW8 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cdk5rap1Q8BTW8 Arhgef4-208ENSMUST00000211073 171 ntBASIC16.89■□□□□ 0.29
Cdk5rap1Q8BTW8 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cdk5rap1Q8BTW8 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC16.89■□□□□ 0.29
Cdk5rap1Q8BTW8 Timm23-208ENSMUST00000226683 750 ntBASIC16.89■□□□□ 0.29
Cdk5rap1Q8BTW8 AC156016.1-201ENSMUST00000227190 1035 ntBASIC16.89■□□□□ 0.29
Cdk5rap1Q8BTW8 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Cdk5rap1Q8BTW8 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cdk5rap1Q8BTW8 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cdk5rap1Q8BTW8 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cdk5rap1Q8BTW8 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cdk5rap1Q8BTW8 Gm7712-202ENSMUST00000222331 1510 ntBASIC16.89■□□□□ 0.29
Cdk5rap1Q8BTW8 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cdk5rap1Q8BTW8 Gm38342-201ENSMUST00000195710 2980 ntBASIC16.89■□□□□ 0.29
Cdk5rap1Q8BTW8 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cdk5rap1Q8BTW8 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Cdk5rap1Q8BTW8 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
Cdk5rap1Q8BTW8 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Cdk5rap1Q8BTW8 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cdk5rap1Q8BTW8 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Cdk5rap1Q8BTW8 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cdk5rap1Q8BTW8 Gm10418-201ENSMUST00000100943 576 ntBASIC16.88■□□□□ 0.29
Cdk5rap1Q8BTW8 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Cdk5rap1Q8BTW8 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Cdk5rap1Q8BTW8 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC16.88■□□□□ 0.29
Cdk5rap1Q8BTW8 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC16.88■□□□□ 0.29
Cdk5rap1Q8BTW8 Odf3b-204ENSMUST00000227834 930 ntBASIC16.88■□□□□ 0.29
Cdk5rap1Q8BTW8 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cdk5rap1Q8BTW8 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cdk5rap1Q8BTW8 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cdk5rap1Q8BTW8 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Cdk5rap1Q8BTW8 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cdk5rap1Q8BTW8 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Cdk5rap1Q8BTW8 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cdk5rap1Q8BTW8 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cdk5rap1Q8BTW8 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cdk5rap1Q8BTW8 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cdk5rap1Q8BTW8 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cdk5rap1Q8BTW8 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC16.87■□□□□ 0.29
Cdk5rap1Q8BTW8 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Cdk5rap1Q8BTW8 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC16.87■□□□□ 0.29
Cdk5rap1Q8BTW8 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Cdk5rap1Q8BTW8 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cdk5rap1Q8BTW8 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC16.87■□□□□ 0.29
Cdk5rap1Q8BTW8 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC16.87■□□□□ 0.29
Cdk5rap1Q8BTW8 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cdk5rap1Q8BTW8 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cdk5rap1Q8BTW8 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Cdk5rap1Q8BTW8 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC16.87■□□□□ 0.29
Cdk5rap1Q8BTW8 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Cdk5rap1Q8BTW8 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Cdk5rap1Q8BTW8 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Cdk5rap1Q8BTW8 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Cdk5rap1Q8BTW8 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cdk5rap1Q8BTW8 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC16.86■□□□□ 0.29
Cdk5rap1Q8BTW8 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cdk5rap1Q8BTW8 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Cdk5rap1Q8BTW8 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Cdk5rap1Q8BTW8 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
Cdk5rap1Q8BTW8 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cdk5rap1Q8BTW8 Gm20472-201ENSMUST00000174403 1240 ntBASIC16.86■□□□□ 0.29
Cdk5rap1Q8BTW8 AC135963.1-201ENSMUST00000211640 717 ntBASIC16.86■□□□□ 0.29
Cdk5rap1Q8BTW8 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cdk5rap1Q8BTW8 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cdk5rap1Q8BTW8 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cdk5rap1Q8BTW8 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC16.86■□□□□ 0.29
Cdk5rap1Q8BTW8 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Cdk5rap1Q8BTW8 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cdk5rap1Q8BTW8 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cdk5rap1Q8BTW8 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cdk5rap1Q8BTW8 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cdk5rap1Q8BTW8 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cdk5rap1Q8BTW8 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cdk5rap1Q8BTW8 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Cdk5rap1Q8BTW8 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cdk5rap1Q8BTW8 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cdk5rap1Q8BTW8 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC16.85■□□□□ 0.29
Cdk5rap1Q8BTW8 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Cdk5rap1Q8BTW8 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Cdk5rap1Q8BTW8 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cdk5rap1Q8BTW8 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cdk5rap1Q8BTW8 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cdk5rap1Q8BTW8 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cdk5rap1Q8BTW8 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC16.85■□□□□ 0.29
Cdk5rap1Q8BTW8 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Cdk5rap1Q8BTW8 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cdk5rap1Q8BTW8 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cdk5rap1Q8BTW8 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cdk5rap1Q8BTW8 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cdk5rap1Q8BTW8 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC16.84■□□□□ 0.29
Cdk5rap1Q8BTW8 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cdk5rap1Q8BTW8 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC16.84■□□□□ 0.29
Cdk5rap1Q8BTW8 AC158538.1-201ENSMUST00000225870 294 ntBASIC16.84■□□□□ 0.29
Cdk5rap1Q8BTW8 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms