Protein–RNA interactions for Protein: Q8BTV2

Cpsf7, Cleavage and polyadenylation specificity factor subunit 7, mousemouse

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf7Q8BTV2 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
Cpsf7Q8BTV2 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Cpsf7Q8BTV2 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Cpsf7Q8BTV2 AC160393.1-201ENSMUST00000218378 1279 ntBASIC17.85■□□□□ 0.45
Cpsf7Q8BTV2 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cpsf7Q8BTV2 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cpsf7Q8BTV2 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cpsf7Q8BTV2 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cpsf7Q8BTV2 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cpsf7Q8BTV2 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cpsf7Q8BTV2 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cpsf7Q8BTV2 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Cpsf7Q8BTV2 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cpsf7Q8BTV2 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cpsf7Q8BTV2 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cpsf7Q8BTV2 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Cpsf7Q8BTV2 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cpsf7Q8BTV2 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
Cpsf7Q8BTV2 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Cpsf7Q8BTV2 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cpsf7Q8BTV2 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cpsf7Q8BTV2 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC17.84■□□□□ 0.45
Cpsf7Q8BTV2 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Cpsf7Q8BTV2 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cpsf7Q8BTV2 Gm13534-201ENSMUST00000121169 513 ntBASIC17.84■□□□□ 0.45
Cpsf7Q8BTV2 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC17.84■□□□□ 0.45
Cpsf7Q8BTV2 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC17.84■□□□□ 0.45
Cpsf7Q8BTV2 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cpsf7Q8BTV2 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cpsf7Q8BTV2 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cpsf7Q8BTV2 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cpsf7Q8BTV2 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cpsf7Q8BTV2 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Cpsf7Q8BTV2 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC17.84■□□□□ 0.45
Cpsf7Q8BTV2 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Cpsf7Q8BTV2 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC17.83■□□□□ 0.45
Cpsf7Q8BTV2 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC17.83■□□□□ 0.45
Cpsf7Q8BTV2 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Cpsf7Q8BTV2 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Cpsf7Q8BTV2 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cpsf7Q8BTV2 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cpsf7Q8BTV2 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Cpsf7Q8BTV2 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cpsf7Q8BTV2 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Cpsf7Q8BTV2 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cpsf7Q8BTV2 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cpsf7Q8BTV2 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cpsf7Q8BTV2 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cpsf7Q8BTV2 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cpsf7Q8BTV2 Gm37563-201ENSMUST00000192580 1513 ntBASIC17.82■□□□□ 0.44
Cpsf7Q8BTV2 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cpsf7Q8BTV2 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC17.82■□□□□ 0.44
Cpsf7Q8BTV2 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cpsf7Q8BTV2 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cpsf7Q8BTV2 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC17.82■□□□□ 0.44
Cpsf7Q8BTV2 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cpsf7Q8BTV2 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cpsf7Q8BTV2 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
Cpsf7Q8BTV2 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cpsf7Q8BTV2 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC17.82■□□□□ 0.44
Cpsf7Q8BTV2 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Cpsf7Q8BTV2 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Cpsf7Q8BTV2 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cpsf7Q8BTV2 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cpsf7Q8BTV2 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Cpsf7Q8BTV2 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cpsf7Q8BTV2 Gm44544-201ENSMUST00000207052 1844 ntBASIC17.82■□□□□ 0.44
Cpsf7Q8BTV2 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cpsf7Q8BTV2 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cpsf7Q8BTV2 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC17.81■□□□□ 0.44
Cpsf7Q8BTV2 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC17.81■□□□□ 0.44
Cpsf7Q8BTV2 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cpsf7Q8BTV2 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Cpsf7Q8BTV2 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cpsf7Q8BTV2 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Cpsf7Q8BTV2 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cpsf7Q8BTV2 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cpsf7Q8BTV2 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC17.81■□□□□ 0.44
Cpsf7Q8BTV2 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cpsf7Q8BTV2 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Cpsf7Q8BTV2 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cpsf7Q8BTV2 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Cpsf7Q8BTV2 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Cpsf7Q8BTV2 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC17.81■□□□□ 0.44
Cpsf7Q8BTV2 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Cpsf7Q8BTV2 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cpsf7Q8BTV2 Gm10493-201ENSMUST00000097270 612 ntBASIC17.81■□□□□ 0.44
Cpsf7Q8BTV2 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Cpsf7Q8BTV2 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC17.81■□□□□ 0.44
Cpsf7Q8BTV2 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cpsf7Q8BTV2 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cpsf7Q8BTV2 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Cpsf7Q8BTV2 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cpsf7Q8BTV2 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cpsf7Q8BTV2 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cpsf7Q8BTV2 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Cpsf7Q8BTV2 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Cpsf7Q8BTV2 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cpsf7Q8BTV2 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cpsf7Q8BTV2 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC17.8■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms