Protein–RNA interactions for Protein: Q8BTF7

Lig4, DNA ligase 4, mousemouse

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lig4Q8BTF7 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Lig4Q8BTF7 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Lig4Q8BTF7 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Lig4Q8BTF7 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Lig4Q8BTF7 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
Lig4Q8BTF7 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Lig4Q8BTF7 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC18.85■□□□□ 0.61
Lig4Q8BTF7 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC18.85■□□□□ 0.61
Lig4Q8BTF7 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC18.85■□□□□ 0.61
Lig4Q8BTF7 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Lig4Q8BTF7 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Lig4Q8BTF7 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Lig4Q8BTF7 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Lig4Q8BTF7 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Lig4Q8BTF7 Gm10461-201ENSMUST00000202073 4786 ntBASIC18.85■□□□□ 0.61
Lig4Q8BTF7 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Lig4Q8BTF7 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Lig4Q8BTF7 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Lig4Q8BTF7 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Lig4Q8BTF7 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Lig4Q8BTF7 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Lig4Q8BTF7 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Lig4Q8BTF7 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Lig4Q8BTF7 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Lig4Q8BTF7 Gm35558-201ENSMUST00000222675 2219 ntBASIC18.84■□□□□ 0.61
Lig4Q8BTF7 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC18.84■□□□□ 0.61
Lig4Q8BTF7 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC18.84■□□□□ 0.61
Lig4Q8BTF7 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC18.84■□□□□ 0.61
Lig4Q8BTF7 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC18.84■□□□□ 0.61
Lig4Q8BTF7 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC18.84■□□□□ 0.61
Lig4Q8BTF7 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
Lig4Q8BTF7 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC18.84■□□□□ 0.61
Lig4Q8BTF7 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Lig4Q8BTF7 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Lig4Q8BTF7 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Lig4Q8BTF7 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Lig4Q8BTF7 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Lig4Q8BTF7 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Lig4Q8BTF7 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Lig4Q8BTF7 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Lig4Q8BTF7 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
Lig4Q8BTF7 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC18.84■□□□□ 0.61
Lig4Q8BTF7 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Lig4Q8BTF7 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
Lig4Q8BTF7 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Lig4Q8BTF7 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
Lig4Q8BTF7 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Lig4Q8BTF7 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Lig4Q8BTF7 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Lig4Q8BTF7 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
Lig4Q8BTF7 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Lig4Q8BTF7 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Lig4Q8BTF7 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC18.83■□□□□ 0.6
Lig4Q8BTF7 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Lig4Q8BTF7 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Lig4Q8BTF7 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Lig4Q8BTF7 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Lig4Q8BTF7 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Lig4Q8BTF7 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Lig4Q8BTF7 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Lig4Q8BTF7 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Lig4Q8BTF7 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC18.82■□□□□ 0.6
Lig4Q8BTF7 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Lig4Q8BTF7 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC18.82■□□□□ 0.6
Lig4Q8BTF7 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Lig4Q8BTF7 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Lig4Q8BTF7 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Lig4Q8BTF7 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Lig4Q8BTF7 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Lig4Q8BTF7 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC18.82■□□□□ 0.6
Lig4Q8BTF7 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Lig4Q8BTF7 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Lig4Q8BTF7 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Lig4Q8BTF7 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Lig4Q8BTF7 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Lig4Q8BTF7 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Lig4Q8BTF7 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Lig4Q8BTF7 Gm10418-201ENSMUST00000100943 576 ntBASIC18.81■□□□□ 0.6
Lig4Q8BTF7 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Lig4Q8BTF7 Gm715-201ENSMUST00000117865 831 ntBASIC18.81■□□□□ 0.6
Lig4Q8BTF7 Gm11643-201ENSMUST00000119578 864 ntBASIC18.81■□□□□ 0.6
Lig4Q8BTF7 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Lig4Q8BTF7 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Lig4Q8BTF7 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Lig4Q8BTF7 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Lig4Q8BTF7 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Lig4Q8BTF7 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Lig4Q8BTF7 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Lig4Q8BTF7 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Lig4Q8BTF7 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Lig4Q8BTF7 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Lig4Q8BTF7 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Lig4Q8BTF7 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Lig4Q8BTF7 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Lig4Q8BTF7 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Lig4Q8BTF7 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Lig4Q8BTF7 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC18.8■□□□□ 0.6
Lig4Q8BTF7 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Lig4Q8BTF7 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Lig4Q8BTF7 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms