Protein–RNA interactions for Protein: Q8BP27

Sfr1, Swi5-dependent recombination DNA repair protein 1 homolog, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sfr1Q8BP27 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC18.09■□□□□ 0.49
Sfr1Q8BP27 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Sfr1Q8BP27 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sfr1Q8BP27 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sfr1Q8BP27 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sfr1Q8BP27 Gm8520-201ENSMUST00000186517 868 ntBASIC18.09■□□□□ 0.49
Sfr1Q8BP27 AC163280.1-201ENSMUST00000228194 1100 ntBASIC18.09■□□□□ 0.49
Sfr1Q8BP27 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sfr1Q8BP27 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Sfr1Q8BP27 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sfr1Q8BP27 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
Sfr1Q8BP27 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
Sfr1Q8BP27 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Sfr1Q8BP27 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Sfr1Q8BP27 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
Sfr1Q8BP27 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Sfr1Q8BP27 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Sfr1Q8BP27 Dmtn-210ENSMUST00000228824 2377 ntBASIC18.08■□□□□ 0.48
Sfr1Q8BP27 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC18.08■□□□□ 0.48
Sfr1Q8BP27 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC18.08■□□□□ 0.48
Sfr1Q8BP27 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Sfr1Q8BP27 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Sfr1Q8BP27 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Sfr1Q8BP27 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Sfr1Q8BP27 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Sfr1Q8BP27 Tgds-204ENSMUST00000228543 1594 ntBASIC18.08■□□□□ 0.48
Sfr1Q8BP27 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Sfr1Q8BP27 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC18.08■□□□□ 0.48
Sfr1Q8BP27 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Sfr1Q8BP27 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Sfr1Q8BP27 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sfr1Q8BP27 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sfr1Q8BP27 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sfr1Q8BP27 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sfr1Q8BP27 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Sfr1Q8BP27 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sfr1Q8BP27 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
Sfr1Q8BP27 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Sfr1Q8BP27 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC18.07■□□□□ 0.48
Sfr1Q8BP27 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Sfr1Q8BP27 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC18.07■□□□□ 0.48
Sfr1Q8BP27 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sfr1Q8BP27 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC18.07■□□□□ 0.48
Sfr1Q8BP27 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sfr1Q8BP27 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sfr1Q8BP27 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sfr1Q8BP27 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sfr1Q8BP27 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sfr1Q8BP27 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Sfr1Q8BP27 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sfr1Q8BP27 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sfr1Q8BP27 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sfr1Q8BP27 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sfr1Q8BP27 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sfr1Q8BP27 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sfr1Q8BP27 Gm13168-201ENSMUST00000121771 632 ntBASIC18.06■□□□□ 0.48
Sfr1Q8BP27 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sfr1Q8BP27 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sfr1Q8BP27 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Sfr1Q8BP27 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Sfr1Q8BP27 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Sfr1Q8BP27 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sfr1Q8BP27 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Sfr1Q8BP27 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sfr1Q8BP27 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sfr1Q8BP27 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC18.05■□□□□ 0.48
Sfr1Q8BP27 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sfr1Q8BP27 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sfr1Q8BP27 Gm5643-201ENSMUST00000117081 966 ntBASIC18.05■□□□□ 0.48
Sfr1Q8BP27 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC18.05■□□□□ 0.48
Sfr1Q8BP27 Gm10138-203ENSMUST00000206952 366 ntBASIC18.05■□□□□ 0.48
Sfr1Q8BP27 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC18.05■□□□□ 0.48
Sfr1Q8BP27 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC18.05■□□□□ 0.48
Sfr1Q8BP27 Mtag2-201ENSMUST00000058665 714 ntBASIC18.05■□□□□ 0.48
Sfr1Q8BP27 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
Sfr1Q8BP27 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sfr1Q8BP27 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC18.05■□□□□ 0.48
Sfr1Q8BP27 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sfr1Q8BP27 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sfr1Q8BP27 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sfr1Q8BP27 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sfr1Q8BP27 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sfr1Q8BP27 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Sfr1Q8BP27 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC18.04■□□□□ 0.48
Sfr1Q8BP27 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Sfr1Q8BP27 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sfr1Q8BP27 Alkbh1-212ENSMUST00000185301 408 ntBASIC18.04■□□□□ 0.48
Sfr1Q8BP27 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sfr1Q8BP27 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sfr1Q8BP27 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sfr1Q8BP27 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sfr1Q8BP27 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sfr1Q8BP27 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sfr1Q8BP27 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sfr1Q8BP27 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
Sfr1Q8BP27 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sfr1Q8BP27 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sfr1Q8BP27 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sfr1Q8BP27 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Sfr1Q8BP27 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms