Protein–RNA interactions for Protein: Q8BGT7

Smndc1, Survival of motor neuron-related-splicing factor 30, mousemouse

Known RBP Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smndc1Q8BGT7 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smndc1Q8BGT7 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smndc1Q8BGT7 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smndc1Q8BGT7 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Smndc1Q8BGT7 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smndc1Q8BGT7 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smndc1Q8BGT7 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smndc1Q8BGT7 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Smndc1Q8BGT7 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Smndc1Q8BGT7 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
Smndc1Q8BGT7 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Smndc1Q8BGT7 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Smndc1Q8BGT7 Gm42642-201ENSMUST00000200683 355 ntBASIC17.27■□□□□ 0.36
Smndc1Q8BGT7 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Smndc1Q8BGT7 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Smndc1Q8BGT7 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC17.27■□□□□ 0.35
Smndc1Q8BGT7 Haglr-201ENSMUST00000100000 2085 ntBASIC17.27■□□□□ 0.35
Smndc1Q8BGT7 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Smndc1Q8BGT7 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smndc1Q8BGT7 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Smndc1Q8BGT7 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Smndc1Q8BGT7 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smndc1Q8BGT7 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC17.26■□□□□ 0.35
Smndc1Q8BGT7 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smndc1Q8BGT7 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Smndc1Q8BGT7 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smndc1Q8BGT7 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smndc1Q8BGT7 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Smndc1Q8BGT7 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smndc1Q8BGT7 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Smndc1Q8BGT7 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smndc1Q8BGT7 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC17.26■□□□□ 0.35
Smndc1Q8BGT7 Gm42569-201ENSMUST00000200539 472 ntBASIC17.26■□□□□ 0.35
Smndc1Q8BGT7 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smndc1Q8BGT7 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smndc1Q8BGT7 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smndc1Q8BGT7 Gm43338-201ENSMUST00000198617 2223 ntBASIC17.26■□□□□ 0.35
Smndc1Q8BGT7 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Smndc1Q8BGT7 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smndc1Q8BGT7 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smndc1Q8BGT7 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Smndc1Q8BGT7 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smndc1Q8BGT7 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Smndc1Q8BGT7 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smndc1Q8BGT7 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smndc1Q8BGT7 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smndc1Q8BGT7 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smndc1Q8BGT7 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smndc1Q8BGT7 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smndc1Q8BGT7 Gm10129-202ENSMUST00000193100 1316 ntBASIC17.25■□□□□ 0.35
Smndc1Q8BGT7 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smndc1Q8BGT7 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC17.25■□□□□ 0.35
Smndc1Q8BGT7 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Smndc1Q8BGT7 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Smndc1Q8BGT7 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smndc1Q8BGT7 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Smndc1Q8BGT7 Gm42778-201ENSMUST00000199644 553 ntBASIC17.25■□□□□ 0.35
Smndc1Q8BGT7 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smndc1Q8BGT7 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smndc1Q8BGT7 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smndc1Q8BGT7 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smndc1Q8BGT7 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smndc1Q8BGT7 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smndc1Q8BGT7 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smndc1Q8BGT7 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smndc1Q8BGT7 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smndc1Q8BGT7 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Smndc1Q8BGT7 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Smndc1Q8BGT7 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smndc1Q8BGT7 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Smndc1Q8BGT7 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Smndc1Q8BGT7 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC17.24■□□□□ 0.35
Smndc1Q8BGT7 AC164629.5-201ENSMUST00000220387 632 ntBASIC17.24■□□□□ 0.35
Smndc1Q8BGT7 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Smndc1Q8BGT7 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smndc1Q8BGT7 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC17.24■□□□□ 0.35
Smndc1Q8BGT7 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Smndc1Q8BGT7 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Smndc1Q8BGT7 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Smndc1Q8BGT7 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smndc1Q8BGT7 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smndc1Q8BGT7 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Smndc1Q8BGT7 Gm7856-201ENSMUST00000117514 1493 ntBASIC17.24■□□□□ 0.35
Smndc1Q8BGT7 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smndc1Q8BGT7 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Smndc1Q8BGT7 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Smndc1Q8BGT7 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Smndc1Q8BGT7 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Smndc1Q8BGT7 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Smndc1Q8BGT7 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Smndc1Q8BGT7 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Smndc1Q8BGT7 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Smndc1Q8BGT7 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Smndc1Q8BGT7 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Smndc1Q8BGT7 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Smndc1Q8BGT7 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
Smndc1Q8BGT7 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC17.23■□□□□ 0.35
Smndc1Q8BGT7 Gm18671-201ENSMUST00000214826 683 ntBASIC17.23■□□□□ 0.35
Smndc1Q8BGT7 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Smndc1Q8BGT7 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 11.8 ms