Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Gm33142-201ENSMUST00000193913 867 ntBASIC19.67■□□□□ 0.74
Usp6nlQ80XC3 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Usp6nlQ80XC3 AC134329.2-201ENSMUST00000217897 428 ntBASIC19.67■□□□□ 0.74
Usp6nlQ80XC3 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Usp6nlQ80XC3 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Usp6nlQ80XC3 Gm5112-201ENSMUST00000204407 2368 ntBASIC19.67■□□□□ 0.74
Usp6nlQ80XC3 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Usp6nlQ80XC3 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
Usp6nlQ80XC3 Gm38308-201ENSMUST00000194934 1809 ntBASIC19.67■□□□□ 0.74
Usp6nlQ80XC3 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Usp6nlQ80XC3 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Usp6nlQ80XC3 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Usp6nlQ80XC3 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Usp6nlQ80XC3 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Usp6nlQ80XC3 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Usp6nlQ80XC3 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Usp6nlQ80XC3 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Usp6nlQ80XC3 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Usp6nlQ80XC3 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC19.66■□□□□ 0.74
Usp6nlQ80XC3 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC19.66■□□□□ 0.74
Usp6nlQ80XC3 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Usp6nlQ80XC3 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Usp6nlQ80XC3 BC021767-201ENSMUST00000126387 1716 ntBASIC19.65■□□□□ 0.74
Usp6nlQ80XC3 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC19.65■□□□□ 0.74
Usp6nlQ80XC3 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Usp6nlQ80XC3 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Usp6nlQ80XC3 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC19.65■□□□□ 0.74
Usp6nlQ80XC3 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC19.65■□□□□ 0.74
Usp6nlQ80XC3 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC19.65■□□□□ 0.74
Usp6nlQ80XC3 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC19.65■□□□□ 0.74
Usp6nlQ80XC3 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
Usp6nlQ80XC3 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Usp6nlQ80XC3 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Usp6nlQ80XC3 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Usp6nlQ80XC3 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Usp6nlQ80XC3 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC19.65■□□□□ 0.74
Usp6nlQ80XC3 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Usp6nlQ80XC3 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Usp6nlQ80XC3 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Usp6nlQ80XC3 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Usp6nlQ80XC3 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC19.64■□□□□ 0.73
Usp6nlQ80XC3 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC19.64■□□□□ 0.73
Usp6nlQ80XC3 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Usp6nlQ80XC3 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Usp6nlQ80XC3 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Usp6nlQ80XC3 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC19.64■□□□□ 0.73
Usp6nlQ80XC3 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Usp6nlQ80XC3 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC19.63■□□□□ 0.73
Usp6nlQ80XC3 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Usp6nlQ80XC3 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Usp6nlQ80XC3 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Usp6nlQ80XC3 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Usp6nlQ80XC3 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC19.63■□□□□ 0.73
Usp6nlQ80XC3 Gm22697-201ENSMUST00000175194 63 ntBASIC19.63■□□□□ 0.73
Usp6nlQ80XC3 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Usp6nlQ80XC3 Gm18101-201ENSMUST00000215769 548 ntBASIC19.63■□□□□ 0.73
Usp6nlQ80XC3 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Usp6nlQ80XC3 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Usp6nlQ80XC3 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Usp6nlQ80XC3 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
Usp6nlQ80XC3 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Usp6nlQ80XC3 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Usp6nlQ80XC3 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Usp6nlQ80XC3 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Usp6nlQ80XC3 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Usp6nlQ80XC3 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Usp6nlQ80XC3 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Usp6nlQ80XC3 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
Usp6nlQ80XC3 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
Usp6nlQ80XC3 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC19.62■□□□□ 0.73
Usp6nlQ80XC3 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Usp6nlQ80XC3 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Usp6nlQ80XC3 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Usp6nlQ80XC3 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Usp6nlQ80XC3 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Usp6nlQ80XC3 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Usp6nlQ80XC3 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Usp6nlQ80XC3 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
Usp6nlQ80XC3 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Usp6nlQ80XC3 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Usp6nlQ80XC3 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Usp6nlQ80XC3 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Usp6nlQ80XC3 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
Usp6nlQ80XC3 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Usp6nlQ80XC3 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Usp6nlQ80XC3 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Usp6nlQ80XC3 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Usp6nlQ80XC3 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Usp6nlQ80XC3 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC19.61■□□□□ 0.73
Usp6nlQ80XC3 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Usp6nlQ80XC3 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC19.61■□□□□ 0.73
Usp6nlQ80XC3 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC19.61■□□□□ 0.73
Usp6nlQ80XC3 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Usp6nlQ80XC3 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Usp6nlQ80XC3 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
Usp6nlQ80XC3 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Usp6nlQ80XC3 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Usp6nlQ80XC3 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Usp6nlQ80XC3 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Usp6nlQ80XC3 Gm9885-202ENSMUST00000186234 2209 ntBASIC19.6■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 85.7 ms