Protein–RNA interactions for Protein: Q80UU2

Rpp38, Ribonuclease P protein subunit p38, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp38Q80UU2 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Rpp38Q80UU2 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Rpp38Q80UU2 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rpp38Q80UU2 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Rpp38Q80UU2 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rpp38Q80UU2 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rpp38Q80UU2 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Rpp38Q80UU2 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Rpp38Q80UU2 Gm18666-201ENSMUST00000190039 958 ntBASIC17.8■□□□□ 0.44
Rpp38Q80UU2 AC135637.1-201ENSMUST00000227750 365 ntBASIC17.8■□□□□ 0.44
Rpp38Q80UU2 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Rpp38Q80UU2 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rpp38Q80UU2 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Rpp38Q80UU2 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Rpp38Q80UU2 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC17.8■□□□□ 0.44
Rpp38Q80UU2 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rpp38Q80UU2 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rpp38Q80UU2 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC17.79■□□□□ 0.44
Rpp38Q80UU2 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC17.79■□□□□ 0.44
Rpp38Q80UU2 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Rpp38Q80UU2 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rpp38Q80UU2 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Rpp38Q80UU2 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Rpp38Q80UU2 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rpp38Q80UU2 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
Rpp38Q80UU2 Gm37820-201ENSMUST00000194021 2147 ntBASIC17.79■□□□□ 0.44
Rpp38Q80UU2 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Rpp38Q80UU2 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Rpp38Q80UU2 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rpp38Q80UU2 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC17.79■□□□□ 0.44
Rpp38Q80UU2 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rpp38Q80UU2 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rpp38Q80UU2 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rpp38Q80UU2 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rpp38Q80UU2 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rpp38Q80UU2 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rpp38Q80UU2 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rpp38Q80UU2 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC17.79■□□□□ 0.44
Rpp38Q80UU2 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rpp38Q80UU2 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rpp38Q80UU2 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Rpp38Q80UU2 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Rpp38Q80UU2 Fcho2-208ENSMUST00000224992 2964 ntBASIC17.78■□□□□ 0.44
Rpp38Q80UU2 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rpp38Q80UU2 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rpp38Q80UU2 Gm44878-201ENSMUST00000205812 1295 ntBASIC17.78■□□□□ 0.44
Rpp38Q80UU2 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rpp38Q80UU2 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rpp38Q80UU2 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Rpp38Q80UU2 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rpp38Q80UU2 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Rpp38Q80UU2 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rpp38Q80UU2 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rpp38Q80UU2 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rpp38Q80UU2 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Rpp38Q80UU2 H2-K2-201ENSMUST00000174250 1049 ntBASIC17.77■□□□□ 0.44
Rpp38Q80UU2 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Rpp38Q80UU2 Mir8112-201ENSMUST00000184382 131 ntBASIC17.77■□□□□ 0.44
Rpp38Q80UU2 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC17.77■□□□□ 0.44
Rpp38Q80UU2 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC17.77■□□□□ 0.44
Rpp38Q80UU2 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
Rpp38Q80UU2 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rpp38Q80UU2 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC17.77■□□□□ 0.43
Rpp38Q80UU2 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
Rpp38Q80UU2 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Rpp38Q80UU2 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Rpp38Q80UU2 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC17.77■□□□□ 0.43
Rpp38Q80UU2 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Rpp38Q80UU2 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rpp38Q80UU2 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Rpp38Q80UU2 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rpp38Q80UU2 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rpp38Q80UU2 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rpp38Q80UU2 Gm13401-201ENSMUST00000117074 291 ntBASIC17.76■□□□□ 0.43
Rpp38Q80UU2 Gm5643-201ENSMUST00000117081 966 ntBASIC17.76■□□□□ 0.43
Rpp38Q80UU2 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC17.76■□□□□ 0.43
Rpp38Q80UU2 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Rpp38Q80UU2 Gm18025-201ENSMUST00000221733 862 ntBASIC17.76■□□□□ 0.43
Rpp38Q80UU2 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rpp38Q80UU2 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rpp38Q80UU2 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Rpp38Q80UU2 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC17.76■□□□□ 0.43
Rpp38Q80UU2 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC17.76■□□□□ 0.43
Rpp38Q80UU2 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rpp38Q80UU2 Zcchc6-207ENSMUST00000225576 2499 ntBASIC17.76■□□□□ 0.43
Rpp38Q80UU2 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rpp38Q80UU2 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rpp38Q80UU2 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC17.75■□□□□ 0.43
Rpp38Q80UU2 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC17.75■□□□□ 0.43
Rpp38Q80UU2 Nrn1-203ENSMUST00000223611 1443 ntBASIC17.75■□□□□ 0.43
Rpp38Q80UU2 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC17.75■□□□□ 0.43
Rpp38Q80UU2 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC17.75■□□□□ 0.43
Rpp38Q80UU2 Gm12669-201ENSMUST00000122162 1009 ntBASIC17.75■□□□□ 0.43
Rpp38Q80UU2 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC17.75■□□□□ 0.43
Rpp38Q80UU2 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC17.75■□□□□ 0.43
Rpp38Q80UU2 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC17.75■□□□□ 0.43
Rpp38Q80UU2 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rpp38Q80UU2 AC166341.7-201ENSMUST00000221698 126 ntBASIC17.75■□□□□ 0.43
Rpp38Q80UU2 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC17.75■□□□□ 0.43
Rpp38Q80UU2 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 68.2 ms