Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC16.41■□□□□ 0.22
Pif1Q80SX8 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pif1Q80SX8 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pif1Q80SX8 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pif1Q80SX8 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Pif1Q80SX8 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pif1Q80SX8 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Pif1Q80SX8 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
Pif1Q80SX8 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC16.4■□□□□ 0.22
Pif1Q80SX8 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pif1Q80SX8 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Pif1Q80SX8 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC16.4■□□□□ 0.22
Pif1Q80SX8 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pif1Q80SX8 Gm7889-201ENSMUST00000185591 958 ntBASIC16.4■□□□□ 0.22
Pif1Q80SX8 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC16.4■□□□□ 0.22
Pif1Q80SX8 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Pif1Q80SX8 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC16.4■□□□□ 0.22
Pif1Q80SX8 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pif1Q80SX8 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Pif1Q80SX8 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pif1Q80SX8 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC16.4■□□□□ 0.22
Pif1Q80SX8 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Pif1Q80SX8 Gm44544-201ENSMUST00000207052 1844 ntBASIC16.4■□□□□ 0.22
Pif1Q80SX8 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pif1Q80SX8 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pif1Q80SX8 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pif1Q80SX8 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pif1Q80SX8 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pif1Q80SX8 Golph3-205ENSMUST00000228671 2842 ntBASIC16.39■□□□□ 0.21
Pif1Q80SX8 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pif1Q80SX8 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pif1Q80SX8 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Pif1Q80SX8 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC16.39■□□□□ 0.21
Pif1Q80SX8 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pif1Q80SX8 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pif1Q80SX8 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pif1Q80SX8 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pif1Q80SX8 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pif1Q80SX8 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Pif1Q80SX8 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pif1Q80SX8 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pif1Q80SX8 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pif1Q80SX8 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pif1Q80SX8 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Pif1Q80SX8 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pif1Q80SX8 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pif1Q80SX8 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pif1Q80SX8 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pif1Q80SX8 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pif1Q80SX8 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC16.38■□□□□ 0.21
Pif1Q80SX8 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Pif1Q80SX8 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC16.38■□□□□ 0.21
Pif1Q80SX8 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC16.38■□□□□ 0.21
Pif1Q80SX8 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
Pif1Q80SX8 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pif1Q80SX8 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC16.38■□□□□ 0.21
Pif1Q80SX8 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Pif1Q80SX8 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pif1Q80SX8 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Pif1Q80SX8 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pif1Q80SX8 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pif1Q80SX8 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Pif1Q80SX8 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pif1Q80SX8 Gm42900-201ENSMUST00000197184 2167 ntBASIC16.37■□□□□ 0.21
Pif1Q80SX8 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pif1Q80SX8 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pif1Q80SX8 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pif1Q80SX8 Rarb-207ENSMUST00000225921 2756 ntBASIC16.37■□□□□ 0.21
Pif1Q80SX8 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pif1Q80SX8 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC16.37■□□□□ 0.21
Pif1Q80SX8 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pif1Q80SX8 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
Pif1Q80SX8 AC159205.6-201ENSMUST00000224935 887 ntBASIC16.37■□□□□ 0.21
Pif1Q80SX8 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Pif1Q80SX8 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pif1Q80SX8 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pif1Q80SX8 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pif1Q80SX8 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Pif1Q80SX8 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pif1Q80SX8 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pif1Q80SX8 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pif1Q80SX8 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Pif1Q80SX8 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pif1Q80SX8 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pif1Q80SX8 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pif1Q80SX8 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pif1Q80SX8 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC16.36■□□□□ 0.21
Pif1Q80SX8 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Pif1Q80SX8 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Pif1Q80SX8 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC16.36■□□□□ 0.21
Pif1Q80SX8 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC16.36■□□□□ 0.21
Pif1Q80SX8 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Pif1Q80SX8 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC16.36■□□□□ 0.21
Pif1Q80SX8 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC16.36■□□□□ 0.21
Pif1Q80SX8 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pif1Q80SX8 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pif1Q80SX8 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Pif1Q80SX8 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Pif1Q80SX8 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pif1Q80SX8 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms