Protein–RNA interactions for Protein: Q6X893

Slc44a1, Choline transporter-like protein 1, mousemouse

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc44a1Q6X893 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Slc44a1Q6X893 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Slc44a1Q6X893 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Slc44a1Q6X893 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC20.68■□□□□ 0.9
Slc44a1Q6X893 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Slc44a1Q6X893 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Slc44a1Q6X893 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Slc44a1Q6X893 Gm42939-201ENSMUST00000197514 2205 ntBASIC20.68■□□□□ 0.9
Slc44a1Q6X893 Gm12382-201ENSMUST00000122005 922 ntBASIC20.67■□□□□ 0.9
Slc44a1Q6X893 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC20.67■□□□□ 0.9
Slc44a1Q6X893 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Slc44a1Q6X893 Gm6576-201ENSMUST00000169678 883 ntBASIC20.67■□□□□ 0.9
Slc44a1Q6X893 AC153881.1-201ENSMUST00000214448 284 ntBASIC20.67■□□□□ 0.9
Slc44a1Q6X893 AC154649.1-201ENSMUST00000227392 384 ntBASIC20.67■□□□□ 0.9
Slc44a1Q6X893 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Slc44a1Q6X893 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Slc44a1Q6X893 Gm10812-201ENSMUST00000099864 546 ntBASIC20.67■□□□□ 0.9
Slc44a1Q6X893 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Slc44a1Q6X893 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
Slc44a1Q6X893 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Slc44a1Q6X893 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Slc44a1Q6X893 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Slc44a1Q6X893 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Slc44a1Q6X893 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Slc44a1Q6X893 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC20.67■□□□□ 0.9
Slc44a1Q6X893 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Slc44a1Q6X893 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Slc44a1Q6X893 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Slc44a1Q6X893 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
Slc44a1Q6X893 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Slc44a1Q6X893 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Slc44a1Q6X893 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Slc44a1Q6X893 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Slc44a1Q6X893 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Slc44a1Q6X893 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Slc44a1Q6X893 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Slc44a1Q6X893 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Slc44a1Q6X893 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Slc44a1Q6X893 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Slc44a1Q6X893 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Slc44a1Q6X893 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Slc44a1Q6X893 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Slc44a1Q6X893 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Slc44a1Q6X893 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Slc44a1Q6X893 AC124581.1-201ENSMUST00000225416 1399 ntBASIC20.65■□□□□ 0.9
Slc44a1Q6X893 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Slc44a1Q6X893 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Slc44a1Q6X893 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Slc44a1Q6X893 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Slc44a1Q6X893 Gm43182-201ENSMUST00000199476 2528 ntBASIC20.65■□□□□ 0.9
Slc44a1Q6X893 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Slc44a1Q6X893 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Slc44a1Q6X893 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Slc44a1Q6X893 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Slc44a1Q6X893 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC20.64■□□□□ 0.89
Slc44a1Q6X893 AC175538.1-201ENSMUST00000225343 1269 ntBASIC20.64■□□□□ 0.89
Slc44a1Q6X893 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Slc44a1Q6X893 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Slc44a1Q6X893 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC20.64■□□□□ 0.89
Slc44a1Q6X893 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Slc44a1Q6X893 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Slc44a1Q6X893 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Slc44a1Q6X893 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Slc44a1Q6X893 CT010444.2-201ENSMUST00000217877 1629 ntBASIC20.64■□□□□ 0.89
Slc44a1Q6X893 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Slc44a1Q6X893 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Slc44a1Q6X893 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Slc44a1Q6X893 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
Slc44a1Q6X893 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Slc44a1Q6X893 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Slc44a1Q6X893 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC20.63■□□□□ 0.89
Slc44a1Q6X893 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC20.63■□□□□ 0.89
Slc44a1Q6X893 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC20.63■□□□□ 0.89
Slc44a1Q6X893 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Slc44a1Q6X893 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Slc44a1Q6X893 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Slc44a1Q6X893 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Slc44a1Q6X893 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Slc44a1Q6X893 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC20.62■□□□□ 0.89
Slc44a1Q6X893 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Slc44a1Q6X893 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Slc44a1Q6X893 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Slc44a1Q6X893 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Slc44a1Q6X893 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Slc44a1Q6X893 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC20.62■□□□□ 0.89
Slc44a1Q6X893 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Slc44a1Q6X893 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Slc44a1Q6X893 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Slc44a1Q6X893 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC20.62■□□□□ 0.89
Slc44a1Q6X893 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Slc44a1Q6X893 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Slc44a1Q6X893 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Slc44a1Q6X893 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Slc44a1Q6X893 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Slc44a1Q6X893 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Slc44a1Q6X893 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Slc44a1Q6X893 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Slc44a1Q6X893 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Slc44a1Q6X893 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Slc44a1Q6X893 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms