Protein–RNA interactions for Protein: Q6TDU8

Casc1, Protein CASC1, mousemouse

Predictions only

Length 730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casc1Q6TDU8 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
Casc1Q6TDU8 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Casc1Q6TDU8 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Casc1Q6TDU8 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Casc1Q6TDU8 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC21.26■□□□□ 0.99
Casc1Q6TDU8 CT025689.6-201ENSMUST00000224991 1104 ntBASIC21.26■□□□□ 0.99
Casc1Q6TDU8 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Casc1Q6TDU8 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Casc1Q6TDU8 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC21.26■□□□□ 0.99
Casc1Q6TDU8 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Casc1Q6TDU8 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Casc1Q6TDU8 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Casc1Q6TDU8 Gm10167-201ENSMUST00000150411 1479 ntBASIC21.26■□□□□ 0.99
Casc1Q6TDU8 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Casc1Q6TDU8 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
Casc1Q6TDU8 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC21.25■□□□□ 0.99
Casc1Q6TDU8 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Casc1Q6TDU8 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Casc1Q6TDU8 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC21.25■□□□□ 0.99
Casc1Q6TDU8 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Casc1Q6TDU8 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Casc1Q6TDU8 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Casc1Q6TDU8 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC21.25■□□□□ 0.99
Casc1Q6TDU8 Gm5297-201ENSMUST00000198555 1171 ntBASIC21.25■□□□□ 0.99
Casc1Q6TDU8 Gm45906-201ENSMUST00000208911 1430 ntBASIC21.25■□□□□ 0.99
Casc1Q6TDU8 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Casc1Q6TDU8 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Casc1Q6TDU8 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Casc1Q6TDU8 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Casc1Q6TDU8 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Casc1Q6TDU8 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Casc1Q6TDU8 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Casc1Q6TDU8 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Casc1Q6TDU8 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC21.25■□□□□ 0.99
Casc1Q6TDU8 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Casc1Q6TDU8 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Casc1Q6TDU8 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Casc1Q6TDU8 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Casc1Q6TDU8 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Casc1Q6TDU8 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Casc1Q6TDU8 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Casc1Q6TDU8 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC21.24■□□□□ 0.99
Casc1Q6TDU8 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Casc1Q6TDU8 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Casc1Q6TDU8 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Casc1Q6TDU8 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Casc1Q6TDU8 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Casc1Q6TDU8 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
Casc1Q6TDU8 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Casc1Q6TDU8 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Casc1Q6TDU8 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Casc1Q6TDU8 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Casc1Q6TDU8 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Casc1Q6TDU8 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Casc1Q6TDU8 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Casc1Q6TDU8 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Casc1Q6TDU8 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Casc1Q6TDU8 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Casc1Q6TDU8 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Casc1Q6TDU8 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Casc1Q6TDU8 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Casc1Q6TDU8 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Casc1Q6TDU8 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Casc1Q6TDU8 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Casc1Q6TDU8 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Casc1Q6TDU8 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Casc1Q6TDU8 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Casc1Q6TDU8 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Casc1Q6TDU8 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Casc1Q6TDU8 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Casc1Q6TDU8 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Casc1Q6TDU8 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Casc1Q6TDU8 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC21.22■□□□□ 0.99
Casc1Q6TDU8 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Casc1Q6TDU8 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Casc1Q6TDU8 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Casc1Q6TDU8 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC21.22■□□□□ 0.99
Casc1Q6TDU8 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Casc1Q6TDU8 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Casc1Q6TDU8 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Casc1Q6TDU8 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Casc1Q6TDU8 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Casc1Q6TDU8 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC21.21■□□□□ 0.99
Casc1Q6TDU8 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Casc1Q6TDU8 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Casc1Q6TDU8 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC21.21■□□□□ 0.99
Casc1Q6TDU8 Gm3807-201ENSMUST00000193520 1168 ntBASIC21.21■□□□□ 0.99
Casc1Q6TDU8 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Casc1Q6TDU8 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC21.21■□□□□ 0.99
Casc1Q6TDU8 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Casc1Q6TDU8 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Casc1Q6TDU8 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Casc1Q6TDU8 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Casc1Q6TDU8 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
Casc1Q6TDU8 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Casc1Q6TDU8 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Casc1Q6TDU8 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC21.2■□□□□ 0.98
Casc1Q6TDU8 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Casc1Q6TDU8 Gm5828-201ENSMUST00000071842 1860 ntBASIC21.2■□□□□ 0.98
Casc1Q6TDU8 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms