Protein–RNA interactions for Protein: Q6T3U4

Npc1l1, Niemann-Pick C1-like protein 1, mousemouse

Predictions only

Length 1,333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1l1Q6T3U4 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Npc1l1Q6T3U4 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
Npc1l1Q6T3U4 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Npc1l1Q6T3U4 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Npc1l1Q6T3U4 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Npc1l1Q6T3U4 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC21.4■■□□□ 1.02
Npc1l1Q6T3U4 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
Npc1l1Q6T3U4 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Npc1l1Q6T3U4 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
Npc1l1Q6T3U4 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
Npc1l1Q6T3U4 Odf3b-204ENSMUST00000227834 930 ntBASIC21.4■■□□□ 1.02
Npc1l1Q6T3U4 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
Npc1l1Q6T3U4 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC21.4■■□□□ 1.02
Npc1l1Q6T3U4 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Npc1l1Q6T3U4 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Npc1l1Q6T3U4 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Npc1l1Q6T3U4 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Npc1l1Q6T3U4 Gm8668-201ENSMUST00000120559 1447 ntBASIC21.4■■□□□ 1.02
Npc1l1Q6T3U4 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
Npc1l1Q6T3U4 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
Npc1l1Q6T3U4 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC21.39■■□□□ 1.01
Npc1l1Q6T3U4 Gm12382-201ENSMUST00000122005 922 ntBASIC21.39■■□□□ 1.01
Npc1l1Q6T3U4 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC21.39■■□□□ 1.01
Npc1l1Q6T3U4 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC21.39■■□□□ 1.01
Npc1l1Q6T3U4 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Npc1l1Q6T3U4 Gm30025-201ENSMUST00000218555 728 ntBASIC21.39■■□□□ 1.01
Npc1l1Q6T3U4 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Npc1l1Q6T3U4 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Npc1l1Q6T3U4 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Npc1l1Q6T3U4 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Npc1l1Q6T3U4 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Npc1l1Q6T3U4 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Npc1l1Q6T3U4 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Npc1l1Q6T3U4 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Npc1l1Q6T3U4 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Npc1l1Q6T3U4 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Npc1l1Q6T3U4 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Npc1l1Q6T3U4 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
Npc1l1Q6T3U4 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Npc1l1Q6T3U4 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Npc1l1Q6T3U4 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Npc1l1Q6T3U4 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Npc1l1Q6T3U4 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Npc1l1Q6T3U4 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Npc1l1Q6T3U4 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC21.37■■□□□ 1.01
Npc1l1Q6T3U4 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
Npc1l1Q6T3U4 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Npc1l1Q6T3U4 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Npc1l1Q6T3U4 Gm45141-201ENSMUST00000206502 1888 ntBASIC21.37■■□□□ 1.01
Npc1l1Q6T3U4 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Npc1l1Q6T3U4 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
Npc1l1Q6T3U4 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Npc1l1Q6T3U4 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC21.37■■□□□ 1.01
Npc1l1Q6T3U4 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Npc1l1Q6T3U4 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
Npc1l1Q6T3U4 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Npc1l1Q6T3U4 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Npc1l1Q6T3U4 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Npc1l1Q6T3U4 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Npc1l1Q6T3U4 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC21.36■■□□□ 1.01
Npc1l1Q6T3U4 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC21.36■■□□□ 1.01
Npc1l1Q6T3U4 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Npc1l1Q6T3U4 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Npc1l1Q6T3U4 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Npc1l1Q6T3U4 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
Npc1l1Q6T3U4 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Npc1l1Q6T3U4 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Npc1l1Q6T3U4 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Npc1l1Q6T3U4 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
Npc1l1Q6T3U4 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC21.36■■□□□ 1.01
Npc1l1Q6T3U4 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Npc1l1Q6T3U4 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC21.36■■□□□ 1.01
Npc1l1Q6T3U4 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Npc1l1Q6T3U4 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Npc1l1Q6T3U4 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Npc1l1Q6T3U4 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Npc1l1Q6T3U4 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
Npc1l1Q6T3U4 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
Npc1l1Q6T3U4 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC21.35■■□□□ 1.01
Npc1l1Q6T3U4 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Npc1l1Q6T3U4 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Npc1l1Q6T3U4 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Npc1l1Q6T3U4 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
Npc1l1Q6T3U4 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Npc1l1Q6T3U4 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Npc1l1Q6T3U4 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Npc1l1Q6T3U4 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Npc1l1Q6T3U4 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Npc1l1Q6T3U4 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Npc1l1Q6T3U4 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Npc1l1Q6T3U4 Gm10418-201ENSMUST00000100943 576 ntBASIC21.34■■□□□ 1.01
Npc1l1Q6T3U4 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Npc1l1Q6T3U4 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Npc1l1Q6T3U4 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Npc1l1Q6T3U4 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
Npc1l1Q6T3U4 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Npc1l1Q6T3U4 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Npc1l1Q6T3U4 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC21.33■■□□□ 1.01
Npc1l1Q6T3U4 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Npc1l1Q6T3U4 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms