Protein–RNA interactions for Protein: Q6QIY3

Scn10a, Sodium channel protein type 10 subunit alpha, mousemouse

Predictions only

Length 1,958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn10aQ6QIY3 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Scn10aQ6QIY3 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC20.31■□□□□ 0.84
Scn10aQ6QIY3 Gm34391-201ENSMUST00000203706 907 ntBASIC20.31■□□□□ 0.84
Scn10aQ6QIY3 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Scn10aQ6QIY3 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Scn10aQ6QIY3 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC20.31■□□□□ 0.84
Scn10aQ6QIY3 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Scn10aQ6QIY3 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Scn10aQ6QIY3 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Scn10aQ6QIY3 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC20.3■□□□□ 0.84
Scn10aQ6QIY3 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC20.3■□□□□ 0.84
Scn10aQ6QIY3 Mir3081-201ENSMUST00000175305 84 ntBASIC20.3■□□□□ 0.84
Scn10aQ6QIY3 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Scn10aQ6QIY3 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Scn10aQ6QIY3 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Scn10aQ6QIY3 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Scn10aQ6QIY3 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Scn10aQ6QIY3 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Scn10aQ6QIY3 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Scn10aQ6QIY3 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Scn10aQ6QIY3 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC20.3■□□□□ 0.84
Scn10aQ6QIY3 Gm18115-201ENSMUST00000221209 621 ntBASIC20.3■□□□□ 0.84
Scn10aQ6QIY3 Gm42922-201ENSMUST00000195887 2078 ntBASIC20.29■□□□□ 0.84
Scn10aQ6QIY3 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Scn10aQ6QIY3 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Scn10aQ6QIY3 Mir770-201ENSMUST00000103252 94 ntBASIC20.29■□□□□ 0.84
Scn10aQ6QIY3 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Scn10aQ6QIY3 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
Scn10aQ6QIY3 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Scn10aQ6QIY3 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Scn10aQ6QIY3 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Scn10aQ6QIY3 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Scn10aQ6QIY3 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Scn10aQ6QIY3 BC021767-201ENSMUST00000126387 1716 ntBASIC20.28■□□□□ 0.84
Scn10aQ6QIY3 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Scn10aQ6QIY3 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Scn10aQ6QIY3 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Scn10aQ6QIY3 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Scn10aQ6QIY3 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Scn10aQ6QIY3 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Scn10aQ6QIY3 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Scn10aQ6QIY3 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC20.28■□□□□ 0.84
Scn10aQ6QIY3 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC20.28■□□□□ 0.84
Scn10aQ6QIY3 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Scn10aQ6QIY3 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Scn10aQ6QIY3 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC20.28■□□□□ 0.84
Scn10aQ6QIY3 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Scn10aQ6QIY3 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Scn10aQ6QIY3 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Scn10aQ6QIY3 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Scn10aQ6QIY3 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC20.27■□□□□ 0.84
Scn10aQ6QIY3 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Scn10aQ6QIY3 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Scn10aQ6QIY3 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Scn10aQ6QIY3 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Scn10aQ6QIY3 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Scn10aQ6QIY3 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Scn10aQ6QIY3 Gm24589-201ENSMUST00000116692 94 ntBASIC20.26■□□□□ 0.83
Scn10aQ6QIY3 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC20.26■□□□□ 0.83
Scn10aQ6QIY3 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC20.26■□□□□ 0.83
Scn10aQ6QIY3 AC164629.2-201ENSMUST00000217916 270 ntBASIC20.26■□□□□ 0.83
Scn10aQ6QIY3 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC20.26■□□□□ 0.83
Scn10aQ6QIY3 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Scn10aQ6QIY3 Spr-ps1-201ENSMUST00000089584 605 ntBASIC20.26■□□□□ 0.83
Scn10aQ6QIY3 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC20.26■□□□□ 0.83
Scn10aQ6QIY3 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
Scn10aQ6QIY3 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Scn10aQ6QIY3 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Scn10aQ6QIY3 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Scn10aQ6QIY3 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
Scn10aQ6QIY3 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Scn10aQ6QIY3 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Scn10aQ6QIY3 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC20.26■□□□□ 0.83
Scn10aQ6QIY3 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC20.26■□□□□ 0.83
Scn10aQ6QIY3 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Scn10aQ6QIY3 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Scn10aQ6QIY3 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Scn10aQ6QIY3 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Scn10aQ6QIY3 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Scn10aQ6QIY3 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Scn10aQ6QIY3 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Scn10aQ6QIY3 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Scn10aQ6QIY3 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Scn10aQ6QIY3 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Scn10aQ6QIY3 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC20.25■□□□□ 0.83
Scn10aQ6QIY3 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC20.25■□□□□ 0.83
Scn10aQ6QIY3 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC20.25■□□□□ 0.83
Scn10aQ6QIY3 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Scn10aQ6QIY3 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Scn10aQ6QIY3 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Scn10aQ6QIY3 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Scn10aQ6QIY3 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Scn10aQ6QIY3 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC20.24■□□□□ 0.83
Scn10aQ6QIY3 Gm26039-201ENSMUST00000158152 144 ntBASIC20.24■□□□□ 0.83
Scn10aQ6QIY3 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Scn10aQ6QIY3 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Scn10aQ6QIY3 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Scn10aQ6QIY3 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Scn10aQ6QIY3 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Scn10aQ6QIY3 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC20.24■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms