Protein–RNA interactions for Protein: Q6PFR5

Tra2a, Transformer-2 protein homolog alpha, mousemouse

Known RBP Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tra2aQ6PFR5 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tra2aQ6PFR5 Gm8258-201ENSMUST00000055593 1449 ntBASIC17.4■□□□□ 0.38
Tra2aQ6PFR5 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tra2aQ6PFR5 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tra2aQ6PFR5 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Tra2aQ6PFR5 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tra2aQ6PFR5 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tra2aQ6PFR5 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Tra2aQ6PFR5 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tra2aQ6PFR5 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC17.4■□□□□ 0.38
Tra2aQ6PFR5 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Tra2aQ6PFR5 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tra2aQ6PFR5 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tra2aQ6PFR5 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tra2aQ6PFR5 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tra2aQ6PFR5 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Tra2aQ6PFR5 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Tra2aQ6PFR5 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Tra2aQ6PFR5 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Tra2aQ6PFR5 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Tra2aQ6PFR5 Ank2-226ENSMUST00000189368 339 ntBASIC17.39■□□□□ 0.37
Tra2aQ6PFR5 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC17.39■□□□□ 0.37
Tra2aQ6PFR5 Gm7370-201ENSMUST00000219471 767 ntBASIC17.39■□□□□ 0.37
Tra2aQ6PFR5 AC120002.2-201ENSMUST00000220205 773 ntBASIC17.39■□□□□ 0.37
Tra2aQ6PFR5 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Tra2aQ6PFR5 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Tra2aQ6PFR5 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Tra2aQ6PFR5 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Tra2aQ6PFR5 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Tra2aQ6PFR5 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Tra2aQ6PFR5 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Tra2aQ6PFR5 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Tra2aQ6PFR5 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tra2aQ6PFR5 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tra2aQ6PFR5 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tra2aQ6PFR5 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC17.38■□□□□ 0.37
Tra2aQ6PFR5 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tra2aQ6PFR5 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tra2aQ6PFR5 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Tra2aQ6PFR5 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Tra2aQ6PFR5 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Tra2aQ6PFR5 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tra2aQ6PFR5 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tra2aQ6PFR5 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
Tra2aQ6PFR5 Gm9885-202ENSMUST00000186234 2209 ntBASIC17.37■□□□□ 0.37
Tra2aQ6PFR5 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tra2aQ6PFR5 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Tra2aQ6PFR5 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Tra2aQ6PFR5 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tra2aQ6PFR5 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Tra2aQ6PFR5 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC17.37■□□□□ 0.37
Tra2aQ6PFR5 Gm7284-201ENSMUST00000131667 944 ntBASIC17.37■□□□□ 0.37
Tra2aQ6PFR5 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Tra2aQ6PFR5 Hsf1-204ENSMUST00000226872 2104 ntBASIC17.37■□□□□ 0.37
Tra2aQ6PFR5 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tra2aQ6PFR5 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tra2aQ6PFR5 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Tra2aQ6PFR5 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tra2aQ6PFR5 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Tra2aQ6PFR5 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tra2aQ6PFR5 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tra2aQ6PFR5 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Tra2aQ6PFR5 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Tra2aQ6PFR5 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC17.36■□□□□ 0.37
Tra2aQ6PFR5 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Tra2aQ6PFR5 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC17.36■□□□□ 0.37
Tra2aQ6PFR5 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC17.36■□□□□ 0.37
Tra2aQ6PFR5 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tra2aQ6PFR5 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tra2aQ6PFR5 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC17.36■□□□□ 0.37
Tra2aQ6PFR5 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tra2aQ6PFR5 Gm37820-201ENSMUST00000194021 2147 ntBASIC17.35■□□□□ 0.37
Tra2aQ6PFR5 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC17.35■□□□□ 0.37
Tra2aQ6PFR5 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Tra2aQ6PFR5 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Tra2aQ6PFR5 AC154471.1-201ENSMUST00000224418 436 ntBASIC17.35■□□□□ 0.37
Tra2aQ6PFR5 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC17.35■□□□□ 0.37
Tra2aQ6PFR5 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tra2aQ6PFR5 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tra2aQ6PFR5 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Tra2aQ6PFR5 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tra2aQ6PFR5 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Tra2aQ6PFR5 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Tra2aQ6PFR5 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tra2aQ6PFR5 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Tra2aQ6PFR5 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC17.34■□□□□ 0.37
Tra2aQ6PFR5 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Tra2aQ6PFR5 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Tra2aQ6PFR5 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Tra2aQ6PFR5 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC17.34■□□□□ 0.37
Tra2aQ6PFR5 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
Tra2aQ6PFR5 Gm7213-201ENSMUST00000215977 950 ntBASIC17.34■□□□□ 0.37
Tra2aQ6PFR5 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tra2aQ6PFR5 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tra2aQ6PFR5 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tra2aQ6PFR5 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tra2aQ6PFR5 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Tra2aQ6PFR5 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Tra2aQ6PFR5 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Tra2aQ6PFR5 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms