Protein–RNA interactions for Protein: Q6PD21

Shb, SH2 domain-containing adapter protein B, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShbQ6PD21 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ShbQ6PD21 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ShbQ6PD21 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
ShbQ6PD21 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC19.36■□□□□ 0.69
ShbQ6PD21 Gm9194-201ENSMUST00000220749 1447 ntBASIC19.36■□□□□ 0.69
ShbQ6PD21 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ShbQ6PD21 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ShbQ6PD21 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ShbQ6PD21 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
ShbQ6PD21 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ShbQ6PD21 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
ShbQ6PD21 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ShbQ6PD21 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ShbQ6PD21 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
ShbQ6PD21 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
ShbQ6PD21 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ShbQ6PD21 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
ShbQ6PD21 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC19.36■□□□□ 0.69
ShbQ6PD21 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ShbQ6PD21 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
ShbQ6PD21 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
ShbQ6PD21 Gm15794-201ENSMUST00000120182 631 ntBASIC19.35■□□□□ 0.69
ShbQ6PD21 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
ShbQ6PD21 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC19.35■□□□□ 0.69
ShbQ6PD21 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
ShbQ6PD21 Gm27525-201ENSMUST00000184465 107 ntBASIC19.35■□□□□ 0.69
ShbQ6PD21 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC19.35■□□□□ 0.69
ShbQ6PD21 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC19.35■□□□□ 0.69
ShbQ6PD21 Ighv6-1-201ENSMUST00000193612 343 ntBASIC19.35■□□□□ 0.69
ShbQ6PD21 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
ShbQ6PD21 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC19.35■□□□□ 0.69
ShbQ6PD21 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ShbQ6PD21 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ShbQ6PD21 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC19.34■□□□□ 0.69
ShbQ6PD21 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
ShbQ6PD21 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ShbQ6PD21 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ShbQ6PD21 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
ShbQ6PD21 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ShbQ6PD21 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC19.34■□□□□ 0.69
ShbQ6PD21 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ShbQ6PD21 Gm43006-201ENSMUST00000197702 1602 ntBASIC19.34■□□□□ 0.69
ShbQ6PD21 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
ShbQ6PD21 Gm10418-201ENSMUST00000100943 576 ntBASIC19.34■□□□□ 0.69
ShbQ6PD21 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ShbQ6PD21 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ShbQ6PD21 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC19.34■□□□□ 0.69
ShbQ6PD21 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC19.34■□□□□ 0.69
ShbQ6PD21 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
ShbQ6PD21 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ShbQ6PD21 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC19.34■□□□□ 0.69
ShbQ6PD21 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
ShbQ6PD21 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
ShbQ6PD21 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ShbQ6PD21 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ShbQ6PD21 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC19.34■□□□□ 0.69
ShbQ6PD21 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
ShbQ6PD21 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ShbQ6PD21 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
ShbQ6PD21 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
ShbQ6PD21 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ShbQ6PD21 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
ShbQ6PD21 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC19.33■□□□□ 0.68
ShbQ6PD21 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.68
ShbQ6PD21 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ShbQ6PD21 AC121961.1-201ENSMUST00000218594 1779 ntBASIC19.33■□□□□ 0.68
ShbQ6PD21 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC19.33■□□□□ 0.68
ShbQ6PD21 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC19.33■□□□□ 0.68
ShbQ6PD21 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
ShbQ6PD21 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ShbQ6PD21 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
ShbQ6PD21 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC19.32■□□□□ 0.68
ShbQ6PD21 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ShbQ6PD21 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ShbQ6PD21 Gm43347-201ENSMUST00000200226 580 ntBASIC19.32■□□□□ 0.68
ShbQ6PD21 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ShbQ6PD21 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
ShbQ6PD21 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ShbQ6PD21 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
ShbQ6PD21 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ShbQ6PD21 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ShbQ6PD21 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC19.31■□□□□ 0.68
ShbQ6PD21 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC19.31■□□□□ 0.68
ShbQ6PD21 Gm37935-201ENSMUST00000192012 982 ntBASIC19.31■□□□□ 0.68
ShbQ6PD21 Gm5712-201ENSMUST00000199748 1043 ntBASIC19.31■□□□□ 0.68
ShbQ6PD21 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC19.31■□□□□ 0.68
ShbQ6PD21 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
ShbQ6PD21 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
ShbQ6PD21 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
ShbQ6PD21 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ShbQ6PD21 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ShbQ6PD21 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC19.31■□□□□ 0.68
ShbQ6PD21 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ShbQ6PD21 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
ShbQ6PD21 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
ShbQ6PD21 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
ShbQ6PD21 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ShbQ6PD21 Gm18733-201ENSMUST00000173950 856 ntBASIC19.3■□□□□ 0.68
ShbQ6PD21 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
ShbQ6PD21 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms