Protein–RNA interactions for Protein: Q6PAV2

Herc4, Probable E3 ubiquitin-protein ligase HERC4, mousemouse

Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc4Q6PAV2 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Herc4Q6PAV2 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Herc4Q6PAV2 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC19.7■□□□□ 0.74
Herc4Q6PAV2 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
Herc4Q6PAV2 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Herc4Q6PAV2 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Herc4Q6PAV2 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Herc4Q6PAV2 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Herc4Q6PAV2 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC19.7■□□□□ 0.74
Herc4Q6PAV2 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Herc4Q6PAV2 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Herc4Q6PAV2 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Herc4Q6PAV2 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Herc4Q6PAV2 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Herc4Q6PAV2 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Herc4Q6PAV2 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC19.69■□□□□ 0.74
Herc4Q6PAV2 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC19.69■□□□□ 0.74
Herc4Q6PAV2 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC19.69■□□□□ 0.74
Herc4Q6PAV2 CT025689.6-201ENSMUST00000224991 1104 ntBASIC19.69■□□□□ 0.74
Herc4Q6PAV2 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Herc4Q6PAV2 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Herc4Q6PAV2 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Herc4Q6PAV2 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Herc4Q6PAV2 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Herc4Q6PAV2 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Herc4Q6PAV2 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Herc4Q6PAV2 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Herc4Q6PAV2 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Herc4Q6PAV2 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Herc4Q6PAV2 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Herc4Q6PAV2 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Herc4Q6PAV2 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Herc4Q6PAV2 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Herc4Q6PAV2 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC19.68■□□□□ 0.74
Herc4Q6PAV2 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Herc4Q6PAV2 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Herc4Q6PAV2 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Herc4Q6PAV2 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Herc4Q6PAV2 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC19.67■□□□□ 0.74
Herc4Q6PAV2 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Herc4Q6PAV2 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Herc4Q6PAV2 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Herc4Q6PAV2 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Herc4Q6PAV2 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Herc4Q6PAV2 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Herc4Q6PAV2 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Herc4Q6PAV2 Gm11249-201ENSMUST00000117071 859 ntBASIC19.67■□□□□ 0.74
Herc4Q6PAV2 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC19.67■□□□□ 0.74
Herc4Q6PAV2 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
Herc4Q6PAV2 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Herc4Q6PAV2 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Herc4Q6PAV2 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Herc4Q6PAV2 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Herc4Q6PAV2 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Herc4Q6PAV2 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Herc4Q6PAV2 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Herc4Q6PAV2 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Herc4Q6PAV2 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Herc4Q6PAV2 Gm27275-201ENSMUST00000184318 272 ntBASIC19.66■□□□□ 0.74
Herc4Q6PAV2 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC19.66■□□□□ 0.74
Herc4Q6PAV2 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Herc4Q6PAV2 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Herc4Q6PAV2 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Herc4Q6PAV2 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC19.66■□□□□ 0.74
Herc4Q6PAV2 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Herc4Q6PAV2 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Herc4Q6PAV2 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Herc4Q6PAV2 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Herc4Q6PAV2 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Herc4Q6PAV2 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC19.66■□□□□ 0.74
Herc4Q6PAV2 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Herc4Q6PAV2 Gm12527-201ENSMUST00000117967 564 ntBASIC19.65■□□□□ 0.74
Herc4Q6PAV2 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC19.65■□□□□ 0.74
Herc4Q6PAV2 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Herc4Q6PAV2 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Herc4Q6PAV2 Gm21596-201ENSMUST00000178049 1316 ntBASIC19.65■□□□□ 0.74
Herc4Q6PAV2 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Herc4Q6PAV2 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Herc4Q6PAV2 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Herc4Q6PAV2 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Herc4Q6PAV2 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Herc4Q6PAV2 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Herc4Q6PAV2 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Herc4Q6PAV2 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Herc4Q6PAV2 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Herc4Q6PAV2 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Herc4Q6PAV2 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC19.64■□□□□ 0.73
Herc4Q6PAV2 Gm5297-201ENSMUST00000198555 1171 ntBASIC19.64■□□□□ 0.73
Herc4Q6PAV2 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Herc4Q6PAV2 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Herc4Q6PAV2 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Herc4Q6PAV2 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Herc4Q6PAV2 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Herc4Q6PAV2 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Herc4Q6PAV2 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Herc4Q6PAV2 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Herc4Q6PAV2 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Herc4Q6PAV2 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Herc4Q6PAV2 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Herc4Q6PAV2 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC19.63■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms