Protein–RNA interactions for Protein: Q6P8X6

Usp50, Putative ubiquitin carboxyl-terminal hydrolase 50, mousemouse

Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp50Q6P8X6 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Usp50Q6P8X6 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Usp50Q6P8X6 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Usp50Q6P8X6 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Usp50Q6P8X6 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC20.55■□□□□ 0.88
Usp50Q6P8X6 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC20.55■□□□□ 0.88
Usp50Q6P8X6 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Usp50Q6P8X6 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Usp50Q6P8X6 Gm13401-201ENSMUST00000117074 291 ntBASIC20.55■□□□□ 0.88
Usp50Q6P8X6 Gm15565-201ENSMUST00000118890 427 ntBASIC20.55■□□□□ 0.88
Usp50Q6P8X6 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Usp50Q6P8X6 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Usp50Q6P8X6 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Usp50Q6P8X6 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC20.55■□□□□ 0.88
Usp50Q6P8X6 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Usp50Q6P8X6 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Usp50Q6P8X6 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Usp50Q6P8X6 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Usp50Q6P8X6 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Usp50Q6P8X6 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Usp50Q6P8X6 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Usp50Q6P8X6 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Usp50Q6P8X6 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC20.54■□□□□ 0.88
Usp50Q6P8X6 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Usp50Q6P8X6 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Usp50Q6P8X6 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Usp50Q6P8X6 Mir7071-201ENSMUST00000184847 69 ntBASIC20.54■□□□□ 0.88
Usp50Q6P8X6 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Usp50Q6P8X6 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC20.54■□□□□ 0.88
Usp50Q6P8X6 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Usp50Q6P8X6 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Usp50Q6P8X6 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Usp50Q6P8X6 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Usp50Q6P8X6 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Usp50Q6P8X6 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Usp50Q6P8X6 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Usp50Q6P8X6 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Usp50Q6P8X6 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Usp50Q6P8X6 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Usp50Q6P8X6 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Usp50Q6P8X6 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Usp50Q6P8X6 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Usp50Q6P8X6 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Usp50Q6P8X6 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Usp50Q6P8X6 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Usp50Q6P8X6 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Usp50Q6P8X6 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Usp50Q6P8X6 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Usp50Q6P8X6 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Usp50Q6P8X6 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Usp50Q6P8X6 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC20.53■□□□□ 0.88
Usp50Q6P8X6 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Usp50Q6P8X6 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Usp50Q6P8X6 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Usp50Q6P8X6 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Usp50Q6P8X6 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Usp50Q6P8X6 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Usp50Q6P8X6 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Usp50Q6P8X6 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Usp50Q6P8X6 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Usp50Q6P8X6 Otx2os1-204ENSMUST00000227221 751 ntBASIC20.52■□□□□ 0.88
Usp50Q6P8X6 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Usp50Q6P8X6 Gm5417-201ENSMUST00000079706 384 ntBASIC20.52■□□□□ 0.88
Usp50Q6P8X6 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC20.52■□□□□ 0.88
Usp50Q6P8X6 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Usp50Q6P8X6 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Usp50Q6P8X6 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Usp50Q6P8X6 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Usp50Q6P8X6 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Usp50Q6P8X6 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Usp50Q6P8X6 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Usp50Q6P8X6 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Usp50Q6P8X6 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC20.51■□□□□ 0.87
Usp50Q6P8X6 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Usp50Q6P8X6 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Usp50Q6P8X6 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Usp50Q6P8X6 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Usp50Q6P8X6 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC20.5■□□□□ 0.87
Usp50Q6P8X6 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Usp50Q6P8X6 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Usp50Q6P8X6 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Usp50Q6P8X6 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC20.5■□□□□ 0.87
Usp50Q6P8X6 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Usp50Q6P8X6 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Usp50Q6P8X6 Gm10517-202ENSMUST00000192970 758 ntBASIC20.5■□□□□ 0.87
Usp50Q6P8X6 Arhgef4-208ENSMUST00000211073 171 ntBASIC20.5■□□□□ 0.87
Usp50Q6P8X6 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Usp50Q6P8X6 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Usp50Q6P8X6 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Usp50Q6P8X6 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Usp50Q6P8X6 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Usp50Q6P8X6 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Usp50Q6P8X6 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Usp50Q6P8X6 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
Usp50Q6P8X6 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Usp50Q6P8X6 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Usp50Q6P8X6 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Usp50Q6P8X6 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Usp50Q6P8X6 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Usp50Q6P8X6 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms