Protein–RNA interactions for Protein: Q6P5D8

Smchd1, Structural maintenance of chromosomes flexible hinge domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 2,007 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smchd1Q6P5D8 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Smchd1Q6P5D8 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Smchd1Q6P5D8 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Smchd1Q6P5D8 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC19.64■□□□□ 0.74
Smchd1Q6P5D8 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
Smchd1Q6P5D8 Gm38027-201ENSMUST00000192315 235 ntBASIC19.64■□□□□ 0.74
Smchd1Q6P5D8 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Smchd1Q6P5D8 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Smchd1Q6P5D8 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Smchd1Q6P5D8 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Smchd1Q6P5D8 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Smchd1Q6P5D8 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Smchd1Q6P5D8 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Smchd1Q6P5D8 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Smchd1Q6P5D8 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Smchd1Q6P5D8 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Smchd1Q6P5D8 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Smchd1Q6P5D8 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Smchd1Q6P5D8 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC19.64■□□□□ 0.73
Smchd1Q6P5D8 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Smchd1Q6P5D8 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Smchd1Q6P5D8 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Smchd1Q6P5D8 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Smchd1Q6P5D8 Gm10231-201ENSMUST00000181584 441 ntBASIC19.63■□□□□ 0.73
Smchd1Q6P5D8 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Smchd1Q6P5D8 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
Smchd1Q6P5D8 Gm10175-202ENSMUST00000208752 441 ntBASIC19.63■□□□□ 0.73
Smchd1Q6P5D8 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Smchd1Q6P5D8 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Smchd1Q6P5D8 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Smchd1Q6P5D8 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Smchd1Q6P5D8 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Smchd1Q6P5D8 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Smchd1Q6P5D8 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Smchd1Q6P5D8 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Smchd1Q6P5D8 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Smchd1Q6P5D8 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Smchd1Q6P5D8 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Smchd1Q6P5D8 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Smchd1Q6P5D8 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Smchd1Q6P5D8 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Smchd1Q6P5D8 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Smchd1Q6P5D8 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Smchd1Q6P5D8 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC19.62■□□□□ 0.73
Smchd1Q6P5D8 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Smchd1Q6P5D8 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Smchd1Q6P5D8 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Smchd1Q6P5D8 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Smchd1Q6P5D8 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Smchd1Q6P5D8 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Smchd1Q6P5D8 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC19.62■□□□□ 0.73
Smchd1Q6P5D8 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC19.62■□□□□ 0.73
Smchd1Q6P5D8 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Smchd1Q6P5D8 AC121577.1-201ENSMUST00000227302 707 ntBASIC19.62■□□□□ 0.73
Smchd1Q6P5D8 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Smchd1Q6P5D8 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Smchd1Q6P5D8 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Smchd1Q6P5D8 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Smchd1Q6P5D8 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC19.61■□□□□ 0.73
Smchd1Q6P5D8 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Smchd1Q6P5D8 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Smchd1Q6P5D8 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Smchd1Q6P5D8 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Smchd1Q6P5D8 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC19.61■□□□□ 0.73
Smchd1Q6P5D8 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Smchd1Q6P5D8 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Smchd1Q6P5D8 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Smchd1Q6P5D8 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Smchd1Q6P5D8 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Smchd1Q6P5D8 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Smchd1Q6P5D8 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Smchd1Q6P5D8 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Smchd1Q6P5D8 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Smchd1Q6P5D8 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Smchd1Q6P5D8 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Smchd1Q6P5D8 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Smchd1Q6P5D8 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Smchd1Q6P5D8 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Smchd1Q6P5D8 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Smchd1Q6P5D8 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC19.6■□□□□ 0.73
Smchd1Q6P5D8 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Smchd1Q6P5D8 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Smchd1Q6P5D8 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Smchd1Q6P5D8 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Smchd1Q6P5D8 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Smchd1Q6P5D8 Gm10517-202ENSMUST00000192970 758 ntBASIC19.59■□□□□ 0.73
Smchd1Q6P5D8 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Smchd1Q6P5D8 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Smchd1Q6P5D8 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC19.59■□□□□ 0.73
Smchd1Q6P5D8 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Smchd1Q6P5D8 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC19.59■□□□□ 0.73
Smchd1Q6P5D8 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Smchd1Q6P5D8 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Smchd1Q6P5D8 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
Smchd1Q6P5D8 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Smchd1Q6P5D8 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.73
Smchd1Q6P5D8 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Smchd1Q6P5D8 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
Smchd1Q6P5D8 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Smchd1Q6P5D8 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 70.1 ms