Protein–RNA interactions for Protein: Q6P1Y1

Rtl3, Retrotransposon Gag-like protein 3, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl3Q6P1Y1 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rtl3Q6P1Y1 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rtl3Q6P1Y1 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rtl3Q6P1Y1 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rtl3Q6P1Y1 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rtl3Q6P1Y1 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Rtl3Q6P1Y1 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC18.41■□□□□ 0.54
Rtl3Q6P1Y1 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rtl3Q6P1Y1 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rtl3Q6P1Y1 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rtl3Q6P1Y1 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rtl3Q6P1Y1 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC18.41■□□□□ 0.54
Rtl3Q6P1Y1 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Rtl3Q6P1Y1 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rtl3Q6P1Y1 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC18.4■□□□□ 0.54
Rtl3Q6P1Y1 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC18.4■□□□□ 0.54
Rtl3Q6P1Y1 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC18.4■□□□□ 0.54
Rtl3Q6P1Y1 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC18.4■□□□□ 0.54
Rtl3Q6P1Y1 AC135963.1-201ENSMUST00000211640 717 ntBASIC18.4■□□□□ 0.54
Rtl3Q6P1Y1 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rtl3Q6P1Y1 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC18.4■□□□□ 0.54
Rtl3Q6P1Y1 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rtl3Q6P1Y1 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Rtl3Q6P1Y1 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rtl3Q6P1Y1 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rtl3Q6P1Y1 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Rtl3Q6P1Y1 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rtl3Q6P1Y1 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rtl3Q6P1Y1 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Rtl3Q6P1Y1 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
Rtl3Q6P1Y1 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Rtl3Q6P1Y1 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Rtl3Q6P1Y1 Gm15375-201ENSMUST00000119510 849 ntBASIC18.39■□□□□ 0.53
Rtl3Q6P1Y1 H2-K2-201ENSMUST00000174250 1049 ntBASIC18.39■□□□□ 0.53
Rtl3Q6P1Y1 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Rtl3Q6P1Y1 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rtl3Q6P1Y1 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rtl3Q6P1Y1 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rtl3Q6P1Y1 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rtl3Q6P1Y1 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rtl3Q6P1Y1 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rtl3Q6P1Y1 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rtl3Q6P1Y1 Gm45560-201ENSMUST00000211492 1472 ntBASIC18.39■□□□□ 0.53
Rtl3Q6P1Y1 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Rtl3Q6P1Y1 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC18.39■□□□□ 0.53
Rtl3Q6P1Y1 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rtl3Q6P1Y1 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rtl3Q6P1Y1 Gm10698-201ENSMUST00000182663 604 ntBASIC18.38■□□□□ 0.53
Rtl3Q6P1Y1 AC154649.1-201ENSMUST00000227392 384 ntBASIC18.38■□□□□ 0.53
Rtl3Q6P1Y1 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rtl3Q6P1Y1 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rtl3Q6P1Y1 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rtl3Q6P1Y1 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Rtl3Q6P1Y1 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rtl3Q6P1Y1 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC18.38■□□□□ 0.53
Rtl3Q6P1Y1 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC18.38■□□□□ 0.53
Rtl3Q6P1Y1 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC18.38■□□□□ 0.53
Rtl3Q6P1Y1 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rtl3Q6P1Y1 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rtl3Q6P1Y1 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC18.37■□□□□ 0.53
Rtl3Q6P1Y1 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rtl3Q6P1Y1 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Rtl3Q6P1Y1 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rtl3Q6P1Y1 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rtl3Q6P1Y1 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC18.37■□□□□ 0.53
Rtl3Q6P1Y1 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rtl3Q6P1Y1 Gm715-201ENSMUST00000117865 831 ntBASIC18.37■□□□□ 0.53
Rtl3Q6P1Y1 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rtl3Q6P1Y1 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Rtl3Q6P1Y1 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC18.37■□□□□ 0.53
Rtl3Q6P1Y1 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Rtl3Q6P1Y1 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rtl3Q6P1Y1 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rtl3Q6P1Y1 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Rtl3Q6P1Y1 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC18.37■□□□□ 0.53
Rtl3Q6P1Y1 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rtl3Q6P1Y1 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rtl3Q6P1Y1 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rtl3Q6P1Y1 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Rtl3Q6P1Y1 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rtl3Q6P1Y1 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Rtl3Q6P1Y1 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Rtl3Q6P1Y1 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rtl3Q6P1Y1 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rtl3Q6P1Y1 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rtl3Q6P1Y1 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rtl3Q6P1Y1 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rtl3Q6P1Y1 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rtl3Q6P1Y1 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
Rtl3Q6P1Y1 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rtl3Q6P1Y1 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Rtl3Q6P1Y1 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rtl3Q6P1Y1 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC18.35■□□□□ 0.53
Rtl3Q6P1Y1 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rtl3Q6P1Y1 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rtl3Q6P1Y1 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC18.35■□□□□ 0.53
Rtl3Q6P1Y1 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rtl3Q6P1Y1 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rtl3Q6P1Y1 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC18.35■□□□□ 0.53
Rtl3Q6P1Y1 Gm13836-201ENSMUST00000121159 501 ntBASIC18.35■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms