Protein–RNA interactions for Protein: Q6NZM9

Hdac4, Histone deacetylase 4, mousemouse

Predictions only

Length 1,076 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac4Q6NZM9 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Hdac4Q6NZM9 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC19.94■□□□□ 0.78
Hdac4Q6NZM9 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Hdac4Q6NZM9 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Hdac4Q6NZM9 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Hdac4Q6NZM9 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Hdac4Q6NZM9 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Hdac4Q6NZM9 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC19.94■□□□□ 0.78
Hdac4Q6NZM9 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Hdac4Q6NZM9 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Hdac4Q6NZM9 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Hdac4Q6NZM9 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Hdac4Q6NZM9 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Hdac4Q6NZM9 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Hdac4Q6NZM9 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Hdac4Q6NZM9 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Hdac4Q6NZM9 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Hdac4Q6NZM9 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC19.93■□□□□ 0.78
Hdac4Q6NZM9 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Hdac4Q6NZM9 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Hdac4Q6NZM9 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC19.93■□□□□ 0.78
Hdac4Q6NZM9 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Hdac4Q6NZM9 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Hdac4Q6NZM9 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Hdac4Q6NZM9 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Hdac4Q6NZM9 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Hdac4Q6NZM9 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Hdac4Q6NZM9 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Hdac4Q6NZM9 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Hdac4Q6NZM9 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Hdac4Q6NZM9 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Hdac4Q6NZM9 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Hdac4Q6NZM9 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Hdac4Q6NZM9 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Hdac4Q6NZM9 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC19.92■□□□□ 0.78
Hdac4Q6NZM9 Gm11249-201ENSMUST00000117071 859 ntBASIC19.92■□□□□ 0.78
Hdac4Q6NZM9 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Hdac4Q6NZM9 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Hdac4Q6NZM9 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Hdac4Q6NZM9 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Hdac4Q6NZM9 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Hdac4Q6NZM9 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Hdac4Q6NZM9 Gm43702-201ENSMUST00000198772 2546 ntBASIC19.92■□□□□ 0.78
Hdac4Q6NZM9 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Hdac4Q6NZM9 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Hdac4Q6NZM9 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Hdac4Q6NZM9 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Hdac4Q6NZM9 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Hdac4Q6NZM9 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
Hdac4Q6NZM9 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Hdac4Q6NZM9 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC19.91■□□□□ 0.78
Hdac4Q6NZM9 Gm21596-201ENSMUST00000178049 1316 ntBASIC19.91■□□□□ 0.78
Hdac4Q6NZM9 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC19.91■□□□□ 0.78
Hdac4Q6NZM9 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Hdac4Q6NZM9 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC19.91■□□□□ 0.78
Hdac4Q6NZM9 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Hdac4Q6NZM9 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Hdac4Q6NZM9 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Hdac4Q6NZM9 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Hdac4Q6NZM9 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Hdac4Q6NZM9 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Hdac4Q6NZM9 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Hdac4Q6NZM9 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
Hdac4Q6NZM9 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Hdac4Q6NZM9 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Hdac4Q6NZM9 Gm10418-201ENSMUST00000100943 576 ntBASIC19.9■□□□□ 0.78
Hdac4Q6NZM9 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC19.9■□□□□ 0.78
Hdac4Q6NZM9 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Hdac4Q6NZM9 AC163280.1-201ENSMUST00000228194 1100 ntBASIC19.9■□□□□ 0.78
Hdac4Q6NZM9 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Hdac4Q6NZM9 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Hdac4Q6NZM9 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Hdac4Q6NZM9 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Hdac4Q6NZM9 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Hdac4Q6NZM9 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Hdac4Q6NZM9 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC19.9■□□□□ 0.78
Hdac4Q6NZM9 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Hdac4Q6NZM9 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Hdac4Q6NZM9 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
Hdac4Q6NZM9 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Hdac4Q6NZM9 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Hdac4Q6NZM9 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Hdac4Q6NZM9 Gm12441-201ENSMUST00000121806 588 ntBASIC19.89■□□□□ 0.77
Hdac4Q6NZM9 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Hdac4Q6NZM9 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC19.89■□□□□ 0.77
Hdac4Q6NZM9 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Hdac4Q6NZM9 Gm37820-201ENSMUST00000194021 2147 ntBASIC19.89■□□□□ 0.77
Hdac4Q6NZM9 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Hdac4Q6NZM9 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Hdac4Q6NZM9 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Hdac4Q6NZM9 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC19.89■□□□□ 0.77
Hdac4Q6NZM9 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Hdac4Q6NZM9 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC19.89■□□□□ 0.77
Hdac4Q6NZM9 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC19.88■□□□□ 0.77
Hdac4Q6NZM9 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Hdac4Q6NZM9 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Hdac4Q6NZM9 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Hdac4Q6NZM9 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC19.88■□□□□ 0.77
Hdac4Q6NZM9 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Hdac4Q6NZM9 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms