Protein–RNA interactions for Protein: Q6H1V1

Best3, Bestrophin-3, mousemouse

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Best3Q6H1V1 AC159205.3-201ENSMUST00000224614 874 ntBASIC21.19■□□□□ 0.98
Best3Q6H1V1 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Best3Q6H1V1 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Best3Q6H1V1 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Best3Q6H1V1 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Best3Q6H1V1 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Best3Q6H1V1 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Best3Q6H1V1 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Best3Q6H1V1 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Best3Q6H1V1 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Best3Q6H1V1 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Best3Q6H1V1 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Best3Q6H1V1 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Best3Q6H1V1 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Best3Q6H1V1 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Best3Q6H1V1 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Best3Q6H1V1 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
Best3Q6H1V1 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Best3Q6H1V1 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Best3Q6H1V1 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC21.17■□□□□ 0.98
Best3Q6H1V1 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Best3Q6H1V1 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Best3Q6H1V1 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC21.17■□□□□ 0.98
Best3Q6H1V1 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Best3Q6H1V1 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Best3Q6H1V1 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Best3Q6H1V1 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Best3Q6H1V1 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Best3Q6H1V1 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Best3Q6H1V1 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Best3Q6H1V1 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Best3Q6H1V1 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Best3Q6H1V1 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Best3Q6H1V1 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Best3Q6H1V1 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Best3Q6H1V1 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Best3Q6H1V1 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC21.16■□□□□ 0.98
Best3Q6H1V1 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC21.16■□□□□ 0.98
Best3Q6H1V1 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Best3Q6H1V1 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC21.16■□□□□ 0.98
Best3Q6H1V1 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Best3Q6H1V1 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC21.16■□□□□ 0.98
Best3Q6H1V1 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Best3Q6H1V1 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
Best3Q6H1V1 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Best3Q6H1V1 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Best3Q6H1V1 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Best3Q6H1V1 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Best3Q6H1V1 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Best3Q6H1V1 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Best3Q6H1V1 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Best3Q6H1V1 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Best3Q6H1V1 Gm27704-201ENSMUST00000185094 107 ntBASIC21.15■□□□□ 0.98
Best3Q6H1V1 AC120002.2-201ENSMUST00000220205 773 ntBASIC21.15■□□□□ 0.98
Best3Q6H1V1 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Best3Q6H1V1 Gm43213-201ENSMUST00000151866 1790 ntBASIC21.15■□□□□ 0.98
Best3Q6H1V1 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Best3Q6H1V1 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Best3Q6H1V1 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Best3Q6H1V1 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Best3Q6H1V1 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Best3Q6H1V1 Gm29518-201ENSMUST00000190858 372 ntBASIC21.14■□□□□ 0.97
Best3Q6H1V1 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
Best3Q6H1V1 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Best3Q6H1V1 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Best3Q6H1V1 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC21.14■□□□□ 0.97
Best3Q6H1V1 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Best3Q6H1V1 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Best3Q6H1V1 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Best3Q6H1V1 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Best3Q6H1V1 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC21.13■□□□□ 0.97
Best3Q6H1V1 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Best3Q6H1V1 Gm7213-201ENSMUST00000215977 950 ntBASIC21.13■□□□□ 0.97
Best3Q6H1V1 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Best3Q6H1V1 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Best3Q6H1V1 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Best3Q6H1V1 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Best3Q6H1V1 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Best3Q6H1V1 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Best3Q6H1V1 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC21.13■□□□□ 0.97
Best3Q6H1V1 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC21.12■□□□□ 0.97
Best3Q6H1V1 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Best3Q6H1V1 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Best3Q6H1V1 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Best3Q6H1V1 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Best3Q6H1V1 Gm14464-201ENSMUST00000119658 1254 ntBASIC21.12■□□□□ 0.97
Best3Q6H1V1 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC21.12■□□□□ 0.97
Best3Q6H1V1 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Best3Q6H1V1 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC21.12■□□□□ 0.97
Best3Q6H1V1 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Best3Q6H1V1 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Best3Q6H1V1 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
Best3Q6H1V1 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Best3Q6H1V1 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Best3Q6H1V1 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Best3Q6H1V1 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC21.11■□□□□ 0.97
Best3Q6H1V1 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Best3Q6H1V1 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC21.11■□□□□ 0.97
Best3Q6H1V1 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Best3Q6H1V1 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms