Protein–RNA interactions for Protein: Q6DIC0

Smarca2, Probable global transcription activator SNF2L2, mousemouse

Predictions only

Length 1,577 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarca2Q6DIC0 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
Smarca2Q6DIC0 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
Smarca2Q6DIC0 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
Smarca2Q6DIC0 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC31.48■■■□□ 2.63
Smarca2Q6DIC0 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
Smarca2Q6DIC0 Mir3081-201ENSMUST00000175305 84 ntBASIC31.48■■■□□ 2.63
Smarca2Q6DIC0 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
Smarca2Q6DIC0 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
Smarca2Q6DIC0 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
Smarca2Q6DIC0 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC31.48■■■□□ 2.63
Smarca2Q6DIC0 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC31.47■■■□□ 2.63
Smarca2Q6DIC0 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
Smarca2Q6DIC0 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC31.47■■■□□ 2.63
Smarca2Q6DIC0 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
Smarca2Q6DIC0 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC31.47■■■□□ 2.63
Smarca2Q6DIC0 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC31.47■■■□□ 2.63
Smarca2Q6DIC0 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
Smarca2Q6DIC0 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC31.47■■■□□ 2.63
Smarca2Q6DIC0 Gm7213-201ENSMUST00000215977 950 ntBASIC31.47■■■□□ 2.63
Smarca2Q6DIC0 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC31.47■■■□□ 2.63
Smarca2Q6DIC0 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
Smarca2Q6DIC0 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC31.46■■■□□ 2.63
Smarca2Q6DIC0 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC31.46■■■□□ 2.63
Smarca2Q6DIC0 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
Smarca2Q6DIC0 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
Smarca2Q6DIC0 Otx2os1-206ENSMUST00000228153 787 ntBASIC31.46■■■□□ 2.63
Smarca2Q6DIC0 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC31.46■■■□□ 2.63
Smarca2Q6DIC0 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC31.46■■■□□ 2.63
Smarca2Q6DIC0 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
Smarca2Q6DIC0 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
Smarca2Q6DIC0 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
Smarca2Q6DIC0 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
Smarca2Q6DIC0 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
Smarca2Q6DIC0 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC31.45■■■□□ 2.63
Smarca2Q6DIC0 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
Smarca2Q6DIC0 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
Smarca2Q6DIC0 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC31.45■■■□□ 2.63
Smarca2Q6DIC0 Spr-ps1-201ENSMUST00000089584 605 ntBASIC31.45■■■□□ 2.63
Smarca2Q6DIC0 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC31.45■■■□□ 2.63
Smarca2Q6DIC0 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC31.45■■■□□ 2.63
Smarca2Q6DIC0 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.62
Smarca2Q6DIC0 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
Smarca2Q6DIC0 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC31.44■■■□□ 2.62
Smarca2Q6DIC0 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC31.44■■■□□ 2.62
Smarca2Q6DIC0 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC31.44■■■□□ 2.62
Smarca2Q6DIC0 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC31.44■■■□□ 2.62
Smarca2Q6DIC0 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
Smarca2Q6DIC0 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC31.44■■■□□ 2.62
Smarca2Q6DIC0 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC31.44■■■□□ 2.62
Smarca2Q6DIC0 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
Smarca2Q6DIC0 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC31.43■■■□□ 2.62
Smarca2Q6DIC0 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
Smarca2Q6DIC0 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC31.43■■■□□ 2.62
Smarca2Q6DIC0 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC31.43■■■□□ 2.62
Smarca2Q6DIC0 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
Smarca2Q6DIC0 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
Smarca2Q6DIC0 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC31.43■■■□□ 2.62
Smarca2Q6DIC0 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
Smarca2Q6DIC0 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC31.42■■■□□ 2.62
Smarca2Q6DIC0 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
Smarca2Q6DIC0 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC31.42■■■□□ 2.62
Smarca2Q6DIC0 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC31.42■■■□□ 2.62
Smarca2Q6DIC0 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
Smarca2Q6DIC0 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC31.41■■■□□ 2.62
Smarca2Q6DIC0 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
Smarca2Q6DIC0 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC31.41■■■□□ 2.62
Smarca2Q6DIC0 Gm3272-201ENSMUST00000181181 1229 ntBASIC31.41■■■□□ 2.62
Smarca2Q6DIC0 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
Smarca2Q6DIC0 Gm10566-201ENSMUST00000086739 996 ntBASIC31.41■■■□□ 2.62
Smarca2Q6DIC0 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC31.41■■■□□ 2.62
Smarca2Q6DIC0 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
Smarca2Q6DIC0 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
Smarca2Q6DIC0 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
Smarca2Q6DIC0 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC31.4■■■□□ 2.62
Smarca2Q6DIC0 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
Smarca2Q6DIC0 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
Smarca2Q6DIC0 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC31.4■■■□□ 2.62
Smarca2Q6DIC0 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
Smarca2Q6DIC0 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC31.39■■■□□ 2.62
Smarca2Q6DIC0 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC31.39■■■□□ 2.62
Smarca2Q6DIC0 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
Smarca2Q6DIC0 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
Smarca2Q6DIC0 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC31.39■■■□□ 2.62
Smarca2Q6DIC0 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC31.39■■■□□ 2.62
Smarca2Q6DIC0 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.61
Smarca2Q6DIC0 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC31.39■■■□□ 2.61
Smarca2Q6DIC0 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC31.39■■■□□ 2.61
Smarca2Q6DIC0 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC31.38■■■□□ 2.61
Smarca2Q6DIC0 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
Smarca2Q6DIC0 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
Smarca2Q6DIC0 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
Smarca2Q6DIC0 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
Smarca2Q6DIC0 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
Smarca2Q6DIC0 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
Smarca2Q6DIC0 Gm11860-201ENSMUST00000122346 1010 ntBASIC31.38■■■□□ 2.61
Smarca2Q6DIC0 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC31.38■■■□□ 2.61
Smarca2Q6DIC0 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
Smarca2Q6DIC0 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
Smarca2Q6DIC0 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
Smarca2Q6DIC0 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms