Protein–RNA interactions for Protein: Q6DD96

Pcdhga7, Protocadherin gamma subfamily A, 7, mousemouse

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga7Q6DD96 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
Pcdhga7Q6DD96 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Pcdhga7Q6DD96 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhga7Q6DD96 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhga7Q6DD96 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhga7Q6DD96 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhga7Q6DD96 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhga7Q6DD96 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhga7Q6DD96 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhga7Q6DD96 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhga7Q6DD96 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhga7Q6DD96 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhga7Q6DD96 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhga7Q6DD96 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhga7Q6DD96 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhga7Q6DD96 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhga7Q6DD96 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhga7Q6DD96 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhga7Q6DD96 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhga7Q6DD96 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhga7Q6DD96 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhga7Q6DD96 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhga7Q6DD96 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhga7Q6DD96 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC17.25■□□□□ 0.35
Pcdhga7Q6DD96 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC17.25■□□□□ 0.35
Pcdhga7Q6DD96 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhga7Q6DD96 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhga7Q6DD96 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhga7Q6DD96 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhga7Q6DD96 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Pcdhga7Q6DD96 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Pcdhga7Q6DD96 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC17.25■□□□□ 0.35
Pcdhga7Q6DD96 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC17.25■□□□□ 0.35
Pcdhga7Q6DD96 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhga7Q6DD96 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhga7Q6DD96 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC17.24■□□□□ 0.35
Pcdhga7Q6DD96 Gm13509-201ENSMUST00000119733 1308 ntBASIC17.24■□□□□ 0.35
Pcdhga7Q6DD96 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhga7Q6DD96 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC17.24■□□□□ 0.35
Pcdhga7Q6DD96 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhga7Q6DD96 Gm10849-201ENSMUST00000100397 618 ntBASIC17.24■□□□□ 0.35
Pcdhga7Q6DD96 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Pcdhga7Q6DD96 Gm26571-201ENSMUST00000181399 666 ntBASIC17.24■□□□□ 0.35
Pcdhga7Q6DD96 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC17.24■□□□□ 0.35
Pcdhga7Q6DD96 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhga7Q6DD96 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC17.24■□□□□ 0.35
Pcdhga7Q6DD96 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
Pcdhga7Q6DD96 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhga7Q6DD96 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhga7Q6DD96 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhga7Q6DD96 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhga7Q6DD96 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhga7Q6DD96 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhga7Q6DD96 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhga7Q6DD96 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhga7Q6DD96 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhga7Q6DD96 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhga7Q6DD96 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhga7Q6DD96 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Pcdhga7Q6DD96 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhga7Q6DD96 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
Pcdhga7Q6DD96 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC17.23■□□□□ 0.35
Pcdhga7Q6DD96 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC17.23■□□□□ 0.35
Pcdhga7Q6DD96 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhga7Q6DD96 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Pcdhga7Q6DD96 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhga7Q6DD96 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
Pcdhga7Q6DD96 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhga7Q6DD96 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhga7Q6DD96 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhga7Q6DD96 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhga7Q6DD96 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhga7Q6DD96 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhga7Q6DD96 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhga7Q6DD96 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC17.22■□□□□ 0.35
Pcdhga7Q6DD96 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhga7Q6DD96 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC17.22■□□□□ 0.35
Pcdhga7Q6DD96 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhga7Q6DD96 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC17.22■□□□□ 0.35
Pcdhga7Q6DD96 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhga7Q6DD96 Gm18284-201ENSMUST00000172604 624 ntBASIC17.22■□□□□ 0.35
Pcdhga7Q6DD96 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC17.22■□□□□ 0.35
Pcdhga7Q6DD96 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhga7Q6DD96 Gm6365-201ENSMUST00000054711 744 ntBASIC17.22■□□□□ 0.35
Pcdhga7Q6DD96 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Pcdhga7Q6DD96 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhga7Q6DD96 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhga7Q6DD96 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC17.22■□□□□ 0.35
Pcdhga7Q6DD96 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhga7Q6DD96 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC17.22■□□□□ 0.35
Pcdhga7Q6DD96 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhga7Q6DD96 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Pcdhga7Q6DD96 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
Pcdhga7Q6DD96 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhga7Q6DD96 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhga7Q6DD96 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhga7Q6DD96 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhga7Q6DD96 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhga7Q6DD96 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
Pcdhga7Q6DD96 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC17.21■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms