Protein–RNA interactions for Protein: Q64739

Col11a2, Collagen alpha-2(XI) chain, mousemouse

Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a2Q64739 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC21.72■■□□□ 1.07
Col11a2Q64739 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC21.72■■□□□ 1.07
Col11a2Q64739 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Col11a2Q64739 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Col11a2Q64739 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC21.72■■□□□ 1.07
Col11a2Q64739 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Col11a2Q64739 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Col11a2Q64739 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Col11a2Q64739 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Col11a2Q64739 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Col11a2Q64739 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC21.72■■□□□ 1.07
Col11a2Q64739 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Col11a2Q64739 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Col11a2Q64739 Gm27742-201ENSMUST00000184667 60 ntBASIC21.72■■□□□ 1.07
Col11a2Q64739 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Col11a2Q64739 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Col11a2Q64739 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Col11a2Q64739 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Col11a2Q64739 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
Col11a2Q64739 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC21.71■■□□□ 1.07
Col11a2Q64739 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC21.71■■□□□ 1.07
Col11a2Q64739 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Col11a2Q64739 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Col11a2Q64739 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Col11a2Q64739 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Col11a2Q64739 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC21.7■■□□□ 1.07
Col11a2Q64739 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC21.7■■□□□ 1.07
Col11a2Q64739 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
Col11a2Q64739 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC21.7■■□□□ 1.06
Col11a2Q64739 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Col11a2Q64739 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC21.7■■□□□ 1.06
Col11a2Q64739 Gm25925-201ENSMUST00000158314 306 ntBASIC21.7■■□□□ 1.06
Col11a2Q64739 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Col11a2Q64739 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
Col11a2Q64739 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Col11a2Q64739 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Col11a2Q64739 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Col11a2Q64739 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
Col11a2Q64739 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
Col11a2Q64739 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC21.7■■□□□ 1.06
Col11a2Q64739 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Col11a2Q64739 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC21.69■■□□□ 1.06
Col11a2Q64739 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC21.69■■□□□ 1.06
Col11a2Q64739 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Col11a2Q64739 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Col11a2Q64739 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Col11a2Q64739 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC21.69■■□□□ 1.06
Col11a2Q64739 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Col11a2Q64739 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Col11a2Q64739 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC21.69■■□□□ 1.06
Col11a2Q64739 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
Col11a2Q64739 AC120002.2-201ENSMUST00000220205 773 ntBASIC21.69■■□□□ 1.06
Col11a2Q64739 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC21.69■■□□□ 1.06
Col11a2Q64739 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Col11a2Q64739 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC21.68■■□□□ 1.06
Col11a2Q64739 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
Col11a2Q64739 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
Col11a2Q64739 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Col11a2Q64739 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Col11a2Q64739 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
Col11a2Q64739 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC21.68■■□□□ 1.06
Col11a2Q64739 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Col11a2Q64739 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Col11a2Q64739 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Col11a2Q64739 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
Col11a2Q64739 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Col11a2Q64739 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Col11a2Q64739 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
Col11a2Q64739 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Col11a2Q64739 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC21.67■■□□□ 1.06
Col11a2Q64739 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC21.67■■□□□ 1.06
Col11a2Q64739 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC21.67■■□□□ 1.06
Col11a2Q64739 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Col11a2Q64739 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Col11a2Q64739 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Col11a2Q64739 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Col11a2Q64739 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Col11a2Q64739 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Col11a2Q64739 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Col11a2Q64739 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Col11a2Q64739 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Col11a2Q64739 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Col11a2Q64739 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Col11a2Q64739 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Col11a2Q64739 Olfr129-201ENSMUST00000122318 993 ntBASIC21.66■■□□□ 1.06
Col11a2Q64739 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC21.66■■□□□ 1.06
Col11a2Q64739 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
Col11a2Q64739 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC21.66■■□□□ 1.06
Col11a2Q64739 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Col11a2Q64739 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Col11a2Q64739 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Col11a2Q64739 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Col11a2Q64739 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Col11a2Q64739 Gm26039-201ENSMUST00000158152 144 ntBASIC21.65■■□□□ 1.06
Col11a2Q64739 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Col11a2Q64739 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Col11a2Q64739 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Col11a2Q64739 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Col11a2Q64739 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.06
Col11a2Q64739 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms